RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CAPN8A6NHC0 703 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3LB9A6J9 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 EFSO43281 561 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC28A2O43868 658 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 USP12O75317 370 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CSO75390 466 aaKnown RBP12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CALCAP01258 141 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3HP0C7X1 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LSSP48449 732 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TAS2R38P59533 333 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZNF445P59923 1031 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3GQ6DHY5 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3CQ6IPX1 549 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBC1D3Q8IZP1 549 aaPredicted RBP12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OXR1Q8N573 874 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 UBR7Q8N806 425 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OR4C6Q8NH72 309 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RNF139Q8WU17 664 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KCNE4Q8WWG9 221 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PAGE5Q96GU1 130 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NOX5Q96PH1 765 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TRIM4Q9C037 500 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MAGEF1Q9HAY2 307 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
SPTLC1P3-201ENST00000403408 EDDM13A0A1B0GTR0 161 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 K7ENP7 123 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MAPK13O15264 365 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FFAR2O15552 330 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PLRG1O43660 514 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RNASEH1O60930 286 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IL1BP01584 269 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ASLP04424 464 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CKMT1AP12532 417 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LCP1P13796 627 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 C5AR1P21730 350 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RGS7P49802 495 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ST8SIA6P61647 398 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ECT2LQ008S8 904 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 E2F1Q01094 437 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MS4A13Q5J8X5 152 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 AGBL4Q5VU57 503 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 RESP18Q5W5W9 173 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PMF1Q6P1K2 205 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 INO80CQ6PI98 192 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IQCHQ86VS3 1027 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TMEM145Q8NBT3 493 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KLK6Q92876 244 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MED8Q96G25 268 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MYOCQ99972 504 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OSBPL2Q9H1P3 480 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 POLR1BQ9H9Y6 1135 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LRRC4Q9HBW1 653 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TMEM8AQ9HCN3 771 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TRPM6Q9BX84 2022 aa12.3□□□□□ -0.44
SPTLC1P3-201ENST00000403408 O00370 1275 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IRAK2O43187 625 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 YEATS4O95619 227 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ADH1BP00325 375 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SRPRAP08240 638 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 UCNP55089 124 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TBX4P57082 545 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ERVPABLB-1P60509 514 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 DAB2P98082 770 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NFKB2Q00653 900 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CNTN1Q12860 1018 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LINC00303Q3SY05 128 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FAM186BQ8IYM0 893 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC22A18ASQ8N1D0 253 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SCML4Q8N228 414 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 HJURPQ8NCD3 748 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 OR52K2Q8NGK3 314 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KCTD13Q8WZ19 329 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 AZIN2Q96A70 460 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 APOLD1Q96LR9 279 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 IMPG2Q9BZV3 1241 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FZD3Q9NPG1 666 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 MAPK8IP1Q9UQF2 711 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 FRMD4BQ9Y2L6 1034 aa12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SPTBN1Q01082 2364 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P3-201ENST00000403408 CENPEQ02224 2701 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LZTS3O60299 673 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PIAS2O75928 621 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NEBLO76041 1014 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 LUC7L3O95232 432 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 PRLRP16471 622 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 TGM2P21980 687 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 NR2F2P24468 414 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SLC11A2P49281 568 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 BST2Q10589 180 aaKnown RBP12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 KCNMA1Q12791 1236 aa12.28□□□□□ -0.44
SPTLC1P3-201ENST00000403408 SRSF6Q13247 344 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms