RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 SH3GL1Q99961 368 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 THAP2Q9H0W7 228 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SNX8Q9Y5X2 465 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 A0A087X1B8 175 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 NFKBIEO00221 500 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 FPGTO14772 594 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PROSCO94903 275 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 KRT8P05787 483 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 C8AP07357 584 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SERPINH1P50454 418 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 AP2B1P63010 937 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CYP51A1Q16850 503 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 GRTP1Q5TC63 336 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 C16orf62Q7Z3J2 963 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TTLL2Q9BWV7 592 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 FAM126AQ9BYI3 521 aaPredicted RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 ARHGAP39Q9C0H5 1083 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ANLNQ9NQW6 1124 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CLIC5Q9NZA1 410 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SUCOQ9UBS9 1254 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 PYCARDQ9ULZ3 195 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 MRPS33Q9Y291 106 aaKnown RBP8.1□□□□□ -1.11
USP47-203ENST00000399455 CLDN11O75508 207 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 KLHL2O95198 593 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 CHGBP05060 677 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 RXRGP48443 463 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 POM121L1PQ3SYA9 428 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ZFP28Q8NHY6 868 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 KAT2BQ92831 832 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 DUSP16Q9BY84 665 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 GPAMQ9HCL2 828 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 FANCFQ9NPI8 374 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TRIM10Q9UDY6 481 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 ZNF112Q9UJU3 913 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TBC1D30Q9Y2I9 924 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PPP1R3GB7ZBB8 358 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 F8VZ95 297 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 OR6A2O95222 327 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 RASGRP1O95267 797 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 VIPP01282 170 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 NAB1Q13506 487 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TRIM60Q495X7 471 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 GALNTL6Q49A17 601 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 SNX30Q5VWJ9 437 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TAF8Q7Z7C8 310 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 KBTBD4Q9NVX7 518 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TRPC4Q9UBN4 977 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 TMCC3Q9ULS5 477 aa8.1□□□□□ -1.11
USP47-203ENST00000399455 O00370 1275 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 PCCBP05166 539 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CASRP41180 1078 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CD151P48509 253 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 NAA20P61599 178 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 NR1I3Q14994 352 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 GRAMD1BQ3KR37 738 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 DENND1BQ6P3S1 775 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 GALNT13Q8IUC8 556 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CELF5Q8N6W0 485 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 CYP2W1Q8TAV3 490 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 HTR3CQ8WXA8 447 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 LRRC46Q96FV0 321 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 FEM1CQ96JP0 617 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 FAM124BQ9H5Z6 455 aaPredicted RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 GTF2IRD1Q9UHL9 959 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ADGRG1Q9Y653 693 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 AGTP01019 485 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 PGAM1P18669 254 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 MPP3Q13368 585 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 PDPK2PQ6A1A2 396 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 STRA8Q7Z7C7 330 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 OR10G6Q8NH81 332 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 TPCN2Q8NHX9 752 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ADAM32Q8TC27 787 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 IRGQQ8WZA9 623 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 KCNMB3Q9NPA1 279 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 IL23AQ9NPF7 189 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 TADA3O75528 432 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 FSBPO95073 299 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 MRPS15P82914 257 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 OTUD4Q01804 1114 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 CRY1Q16526 586 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CENPLQ8N0S6 344 aaPredicted RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 KAZALD1Q96I82 304 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 ECSITQ9BQ95 431 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 AMACRQ9UHK6 382 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 SETD1AO15047 1707 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 ARL5CA6NH57 179 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CTDNEP1O95476 244 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 TRUB2O95900 331 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 EIF2S1P05198 315 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 COL6A1P12109 1028 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 MAGOHP61326 146 aaKnown RBP8.09□□□□□ -1.11
USP47-203ENST00000399455 CNGA2Q16280 664 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 RGS9BPQ6ZS82 235 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 FAM35AQ86V20 835 aa8.09□□□□□ -1.11
USP47-203ENST00000399455 CYP4Z2PQ8N1L4 340 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms