RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 SPARCL1Q14515 664 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 STAT4Q14765 748 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 SLC5A9Q2M3M2 681 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 EMC10Q5UCC4 262 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 FBF1Q8TES7 1133 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 SNRNP27Q8WVK2 155 aaKnown RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 AGAP3Q96P47 875 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 YME1L1Q96TA2 773 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 RABGEF1Q9UJ41 708 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 C5orf42Q9H799 3197 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ALPK3Q96L96 1907 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 SLC12A8A0AV02 714 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ZBBXA8MT70 800 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TLR5O60602 858 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TMED2Q15363 201 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 PID1Q7Z2X4 250 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TFAP2DQ7Z6R9 452 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 PALM2Q8IXS6 379 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ARHGAP18Q8N392 663 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ATP11CQ8NB49 1132 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 PHC3Q8NDX5 983 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 MYEOVQ96EZ4 313 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 CFAP36Q96G28 342 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 RMI1Q9H9A7 625 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 CYP4F11Q9HBI6 524 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 CLIC5Q9NZA1 410 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TCEA3O75764 348 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ZDHHC11BP0C7U3 371 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ABL2P42684 1182 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 RPL10AP62906 217 aaKnown RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 CRADDP78560 199 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 DSG1Q02413 1049 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 SMARCB1Q12824 385 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 MS4A13Q5J8X5 152 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TMEM199Q8N511 208 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 USP33Q8TEY7 942 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 C2orf15Q8WU43 125 aaKnown RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 ARHGEF2Q92974 986 aaKnown RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 HDAC11Q96DB2 347 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 TBC1D31Q96DN5 1066 aa15.51■□□□□ 0.07
COL25A1-201ENST00000399126 CXXC1Q9P0U4 656 aaPredicted RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 KLHL8Q9P2G9 620 aaPredicted RBP15.51■□□□□ 0.07
COL25A1-201ENST00000399126 EIF3HO15372 352 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 ZBTB24O43167 697 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 CNTN5O94779 1100 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 SPATA31D3P0C874 917 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 HOXC13P31276 330 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 CD68P34810 354 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 KCNQ1P51787 676 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 MLLT6P55198 1093 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 SPATA31D4Q6ZUB0 917 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 PDZD4Q76G19 769 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 CIR1Q86X95 450 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 ZNF461Q8TAF7 563 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 DPF3Q92784 378 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 SLC39A8Q9C0K1 460 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 CEP290O15078 2479 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 EME2A4GXA9 379 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 OPHN1O60890 802 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 USP12O75317 370 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 ABLIM3O94929 683 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 GJB5O95377 273 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 HMGA1P17096 107 aaKnown RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 EN2P19622 333 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 SERPINB6P35237 376 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 ALFQ53S48 1182 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 RAP1GAP2Q684P5 730 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 ZSCAN18Q8TBC5 510 aaPredicted RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 XPO6Q96QU8 1125 aaKnown RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 PHACTR1Q9C0D0 580 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 KIF9Q9HAQ2 790 aa15.5■□□□□ 0.07
COL25A1-201ENST00000399126 AFF4Q9UHB7 1163 aaKnown RBP15.5■□□□□ 0.07
COL25A1-201ENST00000399126 DOCK6Q96HP0 2047 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 GOLGA6L7A0A1B0GV03 622 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TCRBV9S1A1TA0A576 114 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 CDH16O75309 829 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TPSB2P20231 275 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 GCKP35557 465 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 MAGEA3P43357 314 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 MMP13P45452 471 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TPSAB1Q15661 275 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 PRPF39Q86UA1 669 aaKnown RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 CMTR2Q8IYT2 770 aaKnown RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 ZNF683Q8IZ20 524 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 DRAXINQ8NBI3 349 aaPredicted RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 IGSF8Q969P0 613 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 ZNF512Q96ME7 567 aaPredicted RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 CCDC77Q9BR77 488 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TMEM106CQ9BVX2 250 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TTLL2Q9BWV7 592 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 OXCT2Q9BYC2 517 aaPredicted RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 SPG21Q9NZD8 308 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 ANAPC1Q9H1A4 1944 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 JCHAINP01591 159 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 LSP1P33241 339 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 MAGEA8P43361 318 aa15.49■□□□□ 0.07
COL25A1-201ENST00000399126 TRIP4Q15650 581 aaPredicted RBP15.49■□□□□ 0.07
COL25A1-201ENST00000399126 PKN2Q16513 984 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms