RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 SEC24AO95486 1093 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 VIL1P09327 827 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 PCNAP12004 261 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ABCG1P45844 678 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 RARRES1P49788 294 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 SERPINH1P50454 418 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 LSM3P62310 102 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 ARHGAP8P85298 464 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TNK2Q07912 1038 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 MAD2L1Q13257 205 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 AMIGO2Q86SJ2 522 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ZNF605Q86T29 641 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 KRT73Q86Y46 540 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 SPPL2AQ8TCT8 520 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 HPS1Q92902 700 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 BORCS5Q969J3 196 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ZNF512Q96ME7 567 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 TBCBQ99426 244 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 EPB41L1Q9H4G0 881 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 RMI1Q9H9A7 625 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 BTBD3Q9Y2F9 522 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 LOC100506127A0A0U1RQW1 187 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 MGAT4DA6NG13 374 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 LYPLA1O75608 230 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 SLC2A3P11169 496 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ODC1P11926 461 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 GRIA4P48058 902 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CENPAP49450 140 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ITPK1Q13572 414 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 EML3Q32P44 896 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CHST13Q8NET6 341 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 S100ZQ8WXG8 99 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 EZH1Q92800 747 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 RCN3Q96D15 328 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 RPRD1AQ96P16 312 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 SPATA16Q9BXB7 569 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 DIP2BQ9P265 1576 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TMEM150BA6NC51 233 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CYB561D2O14569 222 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 SYNCRIPO60506 623 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 MSH3P20585 1137 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 LPIN1Q14693 890 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 GPR162Q16538 588 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ATP13A4Q4VNC1 1196 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TTC30AQ86WT1 665 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 C10orf107Q8IVU9 208 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 FBXO30Q8TB52 745 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TBCDQ9BTW9 1192 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ELP3Q9H9T3 547 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ABI2Q9NYB9 513 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 ATP6V1HQ9UI12 483 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 LSM7Q9UK45 103 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 TMCO1Q9UM00 188 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 PRG3Q9Y2Y8 225 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 CENPXA8MT69 81 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TCF3P15923 654 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ALOX15P16050 662 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 TKTP29401 623 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 CLCN3P51790 818 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ACVR2BQ13705 512 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 UTS2BQ765I0 119 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ARL10Q8N8L6 244 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 RNFT2Q96EX2 444 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CLPTM1LQ96KA5 538 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CLPBQ9H078 707 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 RBM22Q9NW64 420 aaKnown RBP eCLIP8.79□□□□□ -13e-6■■■■□ 26.3
CTNND1-205ENST00000399050 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 ASTN2O75129 1339 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 DPYSL4O14531 572 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CD3EAPO15446 510 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 DYNC1LI2O43237 492 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 SNAP91O60641 907 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 FBXO21O94952 628 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 CHRNA5P30532 468 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 MSLNQ13421 630 aaPredicted RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 CLNKQ7Z7G1 428 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ADHFE1Q8IWW8 467 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 SCUBE3Q8IX30 993 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TMEM132CQ8N3T6 1108 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 OR56A4Q8NGH8 313 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 SPATA20Q8TB22 786 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 DNAJC19Q96DA6 116 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 NUAK2Q9H093 628 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 TRIM39Q9HCM9 518 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 MRPL39Q9NYK5 338 aaKnown RBP8.79□□□□□ -1
CTNND1-205ENST00000399050 INVSQ9Y283 1065 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 PPLO60437 1756 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 ADGRB1O14514 1584 aa8.79□□□□□ -1
CTNND1-205ENST00000399050 KCNH1O95259 989 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 VTNP04004 478 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 EIF2S1P05198 315 aaKnown RBP8.78□□□□□ -1
CTNND1-205ENST00000399050 FMO1Q01740 532 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 LAMTOR4Q0VGL1 99 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 COL9A3Q14050 684 aaPredicted RBP8.78□□□□□ -1
CTNND1-205ENST00000399050 FAM71AQ8IYT1 594 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 SIX5Q8N196 739 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 ST13P5Q8NFI4 369 aaPredicted RBP8.78□□□□□ -1
CTNND1-205ENST00000399050 TRHDEQ9UKU6 1024 aa8.78□□□□□ -1
CTNND1-205ENST00000399050 PRPF19Q9UMS4 504 aaKnown RBP8.78□□□□□ -1
CTNND1-205ENST00000399050 USP20Q9Y2K6 914 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms