RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ANKDD1BA6NHY2 528 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 C1QTNF3-AMACRE9PGA6 284 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 ROGDIQ9GZN7 287 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 ABCG8Q9H221 673 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TNFSF13BQ9Y275 285 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 PPLO60437 1756 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3DA0A087WVF3 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3IA0A087WXS9 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3EA0A087X179 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3KA0A087X1G2 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3FA6NER0 549 aaPredicted RBP11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3LB9A6J9 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 MPOP05164 745 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3HP0C7X1 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 BRCC3P46736 316 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 CHRNB3Q05901 458 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3GQ6DHY5 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3CQ6IPX1 549 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 BNIPLQ7Z465 357 aa11.56□□□□□ -0.56
TTC28-201ENST00000397906 TBC1D3Q8IZP1 549 aaPredicted RBP11.56□□□□□ -0.56
TTC28-201ENST00000397906 OR1D2P34982 312 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 GPR15P49685 360 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 MGAT5Q09328 741 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 NETO2Q8NC67 525 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 SPPL2AQ8TCT8 520 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 SEPHS2Q99611 448 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 BTBD19C9JJ37 291 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 HOXC6P09630 235 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 PGAM1P18669 254 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 IL27RAQ6UWB1 636 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 CDK20Q8IZL9 346 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ZNF786Q8N393 782 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ZMYND8Q9ULU4 1186 aaPredicted RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 RIC1Q4ADV7 1423 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 MMP3P08254 477 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 AGKQ53H12 422 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ARNTL2Q8WYA1 636 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 DEPDC7Q96QD5 511 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 IGF2BP3O00425 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
TTC28-201ENST00000397906 CCT8P50990 548 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 CRYBB1P53674 252 aaPredicted RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 PRKAG1P54619 331 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 SMAD3P84022 425 aaKnown RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 TMEM119Q4V9L6 283 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 WLSQ5T9L3 541 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 AGGF1Q8N302 714 aaeCLIP11.55□□□□□ -0.56
TTC28-201ENST00000397906 PANX3Q96QZ0 392 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 GEMIN8Q9NWZ8 242 aaKnown RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 UBDO15205 165 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 PAEPP09466 180 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 NR2C2P49116 596 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 FGD3Q5JSP0 725 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 KCNK18Q7Z418 384 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 DPP10Q8N608 796 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 MRGBPQ9NV56 204 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 HAO1Q9UJM8 370 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ATG16L2Q8NAA4 619 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ARHGAP20Q9P2F6 1191 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 MAGEB16A2A368 324 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 HLA-DQA2P01906 255 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 CASP5P51878 434 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 DUSP4Q13115 394 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 UTP15Q8TED0 518 aaKnown RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 GOLGA2P5Q9HBQ8 144 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 SKIV2L2P42285 1042 aaKnown RBP11.55□□□□□ -0.56
TTC28-201ENST00000397906 DAB2IPQ5VWQ8 1189 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 MICU2Q8IYU8 434 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 REPS1Q96D71 796 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 PYGMP11217 842 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ATP6V1B1P15313 513 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 RALGDSQ12967 914 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 FERD3LQ96RJ6 166 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 ENTPD4Q9Y227 616 aa11.55□□□□□ -0.56
TTC28-201ENST00000397906 GMFGO60234 142 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 DAB1O75553 588 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 NFKB1P19838 968 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 EFCAB1Q9HAE3 211 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SYBUQ9NX95 663 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 KLHL28Q9NXS3 571 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 BTBD7Q9P203 1132 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SERPINH1P50454 418 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 CCNG2Q16589 344 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MLPHQ9BV36 600 aaPredicted RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 ZYG11BQ9C0D3 744 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 DNPEPQ9ULA0 475 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 A0A0B4J269 797 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 TRUB2O95900 331 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 GRTP1Q5TC63 336 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MFSD7Q6UXD7 560 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 TMEM120AQ9BXJ8 343 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 C1orf232A0A0U1RR37 186 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 LINC00854A0A1B0GVQ3 168 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 KCNA3P22001 575 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 RBL1P28749 1068 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 SLC1A6P48664 564 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 MAXP61244 160 aa11.54□□□□□ -0.56
TTC28-201ENST00000397906 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
TTC28-201ENST00000397906 PSRC1Q6PGN9 363 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms