RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 CBLBQ13191 982 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 BCL2A1Q16548 175 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 BSPRYQ5W0U4 402 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 MAVSQ7Z434 540 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 SCUBE3Q8IX30 993 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 ARL10Q8N8L6 244 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 FAM167AQ96KS9 214 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 EIF2AQ9BY44 585 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 GBA2Q9HCG7 927 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 SF3B1O75533 1304 aaKnown RBP eCLIP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 SOWAHBA6NEL2 793 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 H3BNX3 289 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 ARIH2O95376 493 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 COPAP53621 1224 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 MBTD1Q05BQ5 628 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 PDE1CQ14123 709 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 C16orf72Q14CZ0 275 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 PMF1Q6P1K2 205 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 IYDQ6PHW0 289 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 ISLR2Q6UXK2 745 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 NETO2Q8NC67 525 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 CNBD2Q96M20 576 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 HAUS8Q9BT25 410 aa16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 DHX35Q9H5Z1 703 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-201ENST00000397901 LOC100653049A0A140TA62 436 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ZMPSTE24O75844 475 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 KRT34O76011 436 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PDGFRBP09619 1106 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 KCNT2Q6UVM3 1135 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 C10orf107Q8IVU9 208 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 CATSPER1Q8NEC5 780 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ACTRT2Q8TDY3 377 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 SNX27Q96L92 541 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 B3GNT5Q9BYG0 378 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 SPATC1LQ9H0A9 340 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 TRPV5Q9NQA5 729 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 XPNPEP3Q9NQH7 507 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 MOCS1Q9NZB8 636 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 KIAA1522Q9P206 1035 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PCDHGB4Q9UN71 923 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 FAM32AQ9Y421 112 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 MFHAS1Q9Y4C4 1052 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PCDHGB5Q9Y5G0 923 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 LRRC37A2A6NM11 1700 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ADM5C9JUS6 153 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 NOP56O00567 594 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ADCY6O43306 1168 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 GCATO75600 419 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 P4HA1P13674 534 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 NCF2P19878 526 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 TPSB2P20231 275 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ENTPD1P49961 510 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 SESN2P58004 480 aaPredicted RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PCLAFQ15004 111 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 TPSAB1Q15661 275 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PPM1JQ5JR12 505 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 LCLAT1Q6UWP7 414 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 TIFABQ6ZNK6 161 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 CPB2Q96IY4 423 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ZNF670Q9BS34 389 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 CYP3A43Q9HB55 503 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 ADARB2Q9NS39 739 aaKnown RBP16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 FAM49BQ9NUQ9 324 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 SELENONQ9NZV5 590 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 CDH22Q9UJ99 828 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 POMPQ9Y244 141 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 CSADQ9Y600 493 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 PSAT1Q9Y617 370 aa16.34■□□□□ 0.21
CHMP1A-201ENST00000397901 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PLIN3O60664 434 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 KLHL2O95198 593 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 L1CAMP32004 1257 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 ARRB2P32121 409 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PHKA2P46019 1235 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 STT3AP46977 705 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 IDH3AP50213 366 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 TGFBIQ15582 683 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 TCHHL1Q5QJ38 904 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 MFSD4BQ5TF39 518 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 EFCAB12Q6NXP0 572 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PQLC1Q8N2U9 271 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 TBC1D23Q9NUY8 699 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PSMD13Q9UNM6 376 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 TNFSF13BQ9Y275 285 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 COQ6Q9Y2Z9 468 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 A0A0G2JLL6 359 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 FUOMA2VDF0 154 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 GLRA3O75311 464 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PPARGP37231 505 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 IGBP1P78318 339 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF423Q2M1K9 1284 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 RARS2Q5T160 578 aaKnown RBP16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PPP1R26Q5T8A7 1209 aaPredicted RBP16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PDPK2PQ6A1A2 396 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PRRT2Q7Z6L0 340 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms