RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ZDHHC7Q9NXF8 308 aa13.05□□□□□ -0.32
TRIM39-204ENST00000396548 A0A1W2PRU2 124 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 E7ESA3 106 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SMAPO00193 183 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CACNG3O60359 315 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ZBTB17Q13105 803 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SLC5A9Q2M3M2 681 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 LRRC31Q6UY01 552 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ELMOD1Q8N336 334 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ZIM3Q96PE6 472 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SH3GL2Q99962 352 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 WDR83Q9BRX9 315 aaKnown RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CERS4Q9HA82 394 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ASAH2Q9NR71 780 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 HCFC2Q9Y5Z7 792 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SOBPA7XYQ1 873 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 FGF19O95750 216 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 PTPN2P17706 415 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 HDCP19113 662 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CD68P34810 354 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SLC11A2P49281 568 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 TNK2Q07912 1038 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SLMAPQ14BN4 828 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 RAB30Q15771 203 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ADGRF1Q5T601 910 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 RFWD3Q6PCD5 774 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CCDC13Q8IYE1 715 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 MAML1Q92585 1016 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 TCEAL4Q96EI5 215 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 IGSF9Q9P2J2 1179 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ATP8A1Q9Y2Q0 1164 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 OPHN1O60890 802 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 MBL2P11226 248 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 MAGEA3P43357 314 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 MAPKAPK2P49137 400 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 FNBP1LQ5T0N5 605 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 RNF43Q68DV7 783 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 HTR3DQ70Z44 454 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 ZNF534Q76KX8 674 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 AGGF1Q8N302 714 aaeCLIP13.04□□□□□ -0.32
TRIM39-204ENST00000396548 NACA2Q9H009 215 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 PRO3102Q9H379 93 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 TRPC7Q9HCX4 862 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 CPQQ9Y646 472 aa13.04□□□□□ -0.32
TRIM39-204ENST00000396548 GJA1P17302 382 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 MSS51Q4VC12 460 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 CHSY1Q86X52 802 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 LGI2Q8N0V4 545 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 MAB21L3Q8N8X9 362 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
TRIM39-204ENST00000396548 IL12RB2Q99665 862 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 LRRC4CQ9HCJ2 640 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 RAB6BQ9NRW1 208 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 F5H5T6 163 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 RIPK2O43353 540 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 RHOP08100 348 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 NUDT17P0C025 328 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 TPSB2P20231 275 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 SMAD3P84022 425 aaKnown RBP13.03□□□□□ -0.32
TRIM39-204ENST00000396548 TPSAB1Q15661 275 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 CNTD1Q8N815 330 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 GDPD5Q8WTR4 605 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 ATXN3LQ9H3M9 355 aa13.03□□□□□ -0.32
TRIM39-204ENST00000396548 CDC42EP4Q9H3Q1 356 aaKnown RBP13.03□□□□□ -0.32
TRIM39-204ENST00000396548 ZFP37Q9Y6Q3 630 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-204ENST00000396548 KCNK1O00180 336 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 MATN3O15232 486 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 MTSS1O43312 755 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 MYL4P12829 197 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 DDX6P26196 483 aaKnown RBP eCLIP13.02□□□□□ -0.32
TRIM39-204ENST00000396548 TEX44Q53QW1 395 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 LRIG3Q6UXM1 1119 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 TRMT10CQ7L0Y3 403 aaKnown RBP13.02□□□□□ -0.32
TRIM39-204ENST00000396548 TFAP2DQ7Z6R9 452 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.32
TRIM39-204ENST00000396548 MCUQ8NE86 351 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 HMCESQ96FZ2 354 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.32
TRIM39-204ENST00000396548 MSRAQ9UJ68 235 aa13.02□□□□□ -0.32
TRIM39-204ENST00000396548 ALOX15BO15296 676 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 IRF1P10914 325 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 CDH4P55283 916 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 PARP6Q2NL67 630 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 KCTD11Q693B1 232 aa13.02□□□□□ -0.33
TRIM39-204ENST00000396548 CHST9Q7L1S5 443 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms