RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 FAM183BPQ6ZVS7 135 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 DCLK2Q8N568 766 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 DDI1Q8WTU0 396 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 PDCD6IPQ8WUM4 868 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 NLRP4Q96MN2 994 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 SNRNP25Q9BV90 132 aaKnown RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 B3GNT5Q9BYG0 378 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 INO80BQ9C086 356 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-203ENST00000396547 CDH19Q9H159 772 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 RAB26Q9ULW5 256 aa10.06□□□□□ -0.8
TRIM39-203ENST00000396547 PTPRFP10586 1907 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 C7orf72A4D263 438 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PLOD2O00469 737 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 SLC10A3P09131 477 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CKMT2P17540 419 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 HDCP19113 662 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ME2P23368 584 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 IL4RP24394 825 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CYP2F1P24903 491 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 GRK2P25098 689 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ASPAP45381 313 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-203ENST00000396547 MTX3Q5HYI7 312 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 FAM219BQ5XKK7 198 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF534Q76KX8 674 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 AHI1Q8N157 1196 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 RNF149Q8NC42 400 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 AGAP2Q99490 1192 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 FERMT1Q9BQL6 677 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CNPY3Q9BT09 278 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ARMC7Q9H6L4 198 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PCDH18Q9HCL0 1135 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 RNF19AQ9NV58 838 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 DNAJC28Q9NX36 388 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 THEGQ9P2T0 379 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CDY2AQ9Y6F7 541 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CDY1Q9Y6F8 540 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CROCCQ5TZA2 2017 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 RGSL1A5PLK6 1076 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF195O14628 629 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PEX10O60683 326 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ITGB3P05106 788 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CXCL8P10145 99 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 DPP6P42658 865 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 NAGLUP54802 743 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 CAPSQ13938 189 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 SUPT20HL1Q3ZLR7 823 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 C16orf89Q6UX73 402 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 STRA8Q7Z7C7 330 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 BRSK2Q8IWQ3 736 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF786Q8N393 782 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 C7orf31Q8N865 590 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 FAM151AQ8WW52 585 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ANKRD36BP1Q96IX9 119 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 ELOVL4Q9GZR5 314 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 TIMMDC1Q9NPL8 285 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 SNX15Q9NRS6 342 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 SYBUQ9NX95 663 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 EBF1Q9UH73 591 aa10.05□□□□□ -0.8
TRIM39-203ENST00000396547 PAIP2BQ9ULR5 123 aaKnown RBP10.05□□□□□ -0.8
TRIM39-203ENST00000396547 SAC3D1A6NKF1 404 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 B4GALT5O43286 388 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 ZNF143P52747 638 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 NDST2P52849 883 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 SLC5A3P53794 718 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 SP2Q02086 613 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 PITRM1Q5JRX3 1037 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 SNRNP48Q6IEG0 339 aaKnown RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 POTEHQ6S545 545 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 FASTKD5Q7L8L6 764 aaKnown RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 VSIG10LQ86VR7 867 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 WDR49Q8IV35 697 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 NUP93Q8N1F7 819 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 COLGALT1Q8NBJ5 622 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 GATA5Q9BWX5 397 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 PORCNQ9H237 461 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 EPB41L1Q9H4G0 881 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 NOL11Q9H8H0 719 aaKnown RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 GBA2Q9HCG7 927 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 RIMS3Q9UJD0 308 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 SH3GLB1Q9Y371 365 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 RNF11Q9Y3C5 154 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 A0A096LPK6 155 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 TMEM233B4DJY2 109 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 GIPC1O14908 333 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 RGS20O76081 388 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 PIGNO95427 931 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 JUNP05412 331 aaKnown RBP10.04□□□□□ -0.8
TRIM39-203ENST00000396547 KCNA2P16389 499 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 MAGEA8P43361 318 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 MPP3Q13368 585 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
TRIM39-203ENST00000396547 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms