RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NEK3P51956 506 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 RPL10AP62906 217 aaKnown RBP16.51■□□□□ 0.23
SNX6-202ENST00000396526 CRADDP78560 199 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 CDH17Q12864 832 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 TIFABQ6ZNK6 161 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 RASSF3Q86WH2 238 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 TP53INP2Q8IXH6 220 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNX6-202ENST00000396526 SLCO1B3Q9NPD5 702 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 ATP5HO75947 161 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 CCNB1P14635 433 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 BMPR2Q13873 1038 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 SCD5Q86SK9 330 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PPP1R14CQ8TAE6 165 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 ZNF669Q96BR6 464 aaPredicted RBP16.51■□□□□ 0.23
SNX6-202ENST00000396526 C1orf74Q96LT6 269 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PGLYRP2Q96PD5 576 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 ABCF3Q9NUQ8 709 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 MKS1Q9NXB0 559 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PRKAG3Q9UGI9 489 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 DNM1LO00429 736 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 DNAJC8O75937 253 aaPredicted RBP16.51■□□□□ 0.23
SNX6-202ENST00000396526 GP5P40197 560 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 MLLT6P55198 1093 aaPredicted RBP16.51■□□□□ 0.23
SNX6-202ENST00000396526 MGAT5BQ3V5L5 792 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 MSANTD2Q6P1R3 559 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 CERS2Q96G23 380 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
SNX6-202ENST00000396526 MSI1O43347 362 aaKnown RBP16.5■□□□□ 0.23
SNX6-202ENST00000396526 PARNO95453 639 aaKnown RBP16.5■□□□□ 0.23
SNX6-202ENST00000396526 SPRP35270 261 aaPredicted RBP16.5■□□□□ 0.23
SNX6-202ENST00000396526 NRG1Q02297 640 aaPredicted RBP16.5■□□□□ 0.23
SNX6-202ENST00000396526 GRTP1Q5TC63 336 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 CPNE1Q99829 537 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 SMYD2Q9NRG4 433 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 PCMTD2Q9NV79 361 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 COMMD8Q9NX08 183 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 CLIC5Q9NZA1 410 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 ATP9BO43861 1147 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 C1QAP02745 245 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 CRHR1P34998 444 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 GEMP55040 296 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 CCDC15Q0P6D6 951 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 ANKS3Q6ZW76 656 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 NUDCD3Q8IVD9 361 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 NMUR1Q9HB89 426 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 PIH1D1Q9NWS0 290 aaKnown RBP16.5■□□□□ 0.23
SNX6-202ENST00000396526 NSMCE4AQ9NXX6 385 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
SNX6-202ENST00000396526 UBOX5O94941 541 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 PACS1Q6VY07 963 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 NPAS4Q8IUM7 802 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 RTL3Q8N8U3 475 aaKnown RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 ATAD1Q8NBU5 361 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 C2orf15Q8WU43 125 aaKnown RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 ARNTL2Q8WYA1 636 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 DCDC2Q9UHG0 476 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 E9PAM4 449 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 MATN3O15232 486 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 USP1O94782 785 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 DHRS4L1P0CG22 281 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 HOXC13P31276 330 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 CCNFP41002 786 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 KPNA1P52294 538 aaPredicted RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 KYAT3Q6YP21 454 aaKnown RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 OTOAQ7RTW8 1153 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 USP33Q8TEY7 942 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 SPOCK2Q92563 424 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 OXNAD1Q96HP4 312 aaPredicted RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 TXLNGQ9NUQ3 528 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 FAM237BA0A1B0GVD1 139 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 KCNU1A8MYU2 1149 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 B4GALT3O60512 393 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 GLRA3O75311 464 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 USP12O75317 370 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 RFPL1O75677 317 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 TYK2P29597 1187 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 EFEMP1Q12805 493 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 ZBTB17Q13105 803 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 GPR17Q13304 367 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 SDHAF4Q5VUM1 108 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 GABPB2Q8TAK5 448 aaPredicted RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 SEPT5Q99719 369 aaPredicted RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 ALG13Q9NP73 1137 aaKnown RBP16.49■□□□□ 0.23
SNX6-202ENST00000396526 TRIM17Q9Y577 477 aa16.49■□□□□ 0.23
SNX6-202ENST00000396526 CDK7P50613 346 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 RASSF2P50749 326 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 APLP1P51693 650 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 TMPRSS15P98073 1019 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 EIF4EBP2Q13542 120 aaPredicted RBP16.48■□□□□ 0.23
SNX6-202ENST00000396526 ZNF354CQ86Y25 554 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 ARMC2Q8NEN0 867 aa16.48■□□□□ 0.23
SNX6-202ENST00000396526 SREK1Q8WXA9 508 aaKnown RBP16.48■□□□□ 0.23
SNX6-202ENST00000396526 GMIPQ9P107 970 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms