RNA–Protein interactions for RNA: ENST00000396247.7

RDH13-202, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-202ENST00000396247 TDRPQ86YL5 185 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 ARHGAP12Q8IWW6 846 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 AGGF1Q8N302 714 aaeCLIP17.35■□□□□ 0.37
RDH13-202ENST00000396247 ZNF276Q8N554 614 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 RTL3Q8N8U3 475 aaKnown RBP17.35■□□□□ 0.37
RDH13-202ENST00000396247 MAGEC3Q8TD91 643 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 AUTS2Q8WXX7 1259 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 LRRC39Q96DD0 335 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 SGSM3Q96HU1 749 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 ZNF317Q96PQ6 595 aaPredicted RBP17.35■□□□□ 0.37
RDH13-202ENST00000396247 VAT1Q99536 393 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 CCDC134Q9H6E4 229 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 MRPL17Q9NRX2 175 aaKnown RBP17.35■□□□□ 0.37
RDH13-202ENST00000396247 MPP6Q9NZW5 540 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 TBK1Q9UHD2 729 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 RABGEF1Q9UJ41 708 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 TRHDEQ9UKU6 1024 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 VANGL2Q9ULK5 521 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 YIPF1Q9Y548 306 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 PCDHB12Q9Y5F1 795 aa17.35■□□□□ 0.37
RDH13-202ENST00000396247 NUP205Q92621 2012 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 POC1B-GALNT4F8VUJ3 575 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 DNAJC8O75937 253 aaPredicted RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 FGBP02675 491 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 HMGA1P17096 107 aaKnown RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 MAGEA3P43357 314 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 SCTRP47872 440 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.378e-9■■□□□ 13.7
RDH13-202ENST00000396247 ITIH4Q14624 930 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 SNX30Q5VWJ9 437 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 PDCD7Q8N8D1 485 aaKnown RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 FBF1Q8TES7 1133 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 ARHGEF2Q92974 986 aaKnown RBP17.34■□□□□ 0.37
RDH13-202ENST00000396247 TSGA13Q96PP4 275 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 ACSS3Q9H6R3 686 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 EURLQ9NYK6 297 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 PRKAG2Q9UGJ0 569 aa17.34■□□□□ 0.37
RDH13-202ENST00000396247 MYO18AQ92614 2054 aaKnown RBP17.33■□□□□ 0.37
RDH13-202ENST00000396247 WASH4PA8MWX3 477 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 SPAG6O75602 509 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 GJB5O95377 273 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 CHN1P15882 459 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 CCNCP24863 283 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 GCAP28676 217 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 ATP5C1P36542 298 aaKnown RBP17.33■□□□□ 0.37
RDH13-202ENST00000396247 ZBTB17Q13105 803 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 SNCBQ16143 134 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 TAF12Q16514 161 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 KLHL38Q2WGJ6 581 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 TEX44Q53QW1 395 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 ACBD5Q5T8D3 534 aaPredicted RBP17.33■□□□□ 0.37
RDH13-202ENST00000396247 CYB5D1Q6P9G0 228 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 EXOC3L1Q86VI1 746 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 MYRFLQ96LU7 910 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 SLC39A8Q9C0K1 460 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 NDFIP2Q9NV92 336 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 FNIP2Q9P278 1114 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 PPARGC1AQ9UBK2 798 aaKnown RBP17.33■□□□□ 0.37
RDH13-202ENST00000396247 FETUBQ9UGM5 382 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 SLC24A2Q9UI40 661 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 DNMT3LQ9UJW3 386 aa17.33■□□□□ 0.37
RDH13-202ENST00000396247 HBS1LQ9Y450 684 aaKnown RBP17.33■□□□□ 0.37
RDH13-202ENST00000396247 ZNF840PA6NDX5 716 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 PRRG1O14668 218 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 GSTA1P08263 222 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 MLNP12872 115 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 RHOQP17081 205 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 ELF1P32519 619 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 GRIA1P42261 906 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 MTA1Q13330 715 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 VEPH1Q14D04 833 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 NUGGCQ68CJ6 796 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 ITPRIPL1Q6GPH6 555 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 PARP9Q8IXQ6 854 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 GPR65Q8IYL9 337 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 CYP4X1Q8N118 509 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 FIBCD1Q8N539 461 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 MDM1Q8TC05 714 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 ATXN2LQ8WWM7 1075 aaKnown RBP17.33■□□□□ 0.36
RDH13-202ENST00000396247 DPF3Q92784 378 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 AGAP3Q96P47 875 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 SELENOSQ9BQE4 189 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 ZYG11BQ9C0D3 744 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 NACA2Q9H009 215 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 NSRP1Q9H0G5 558 aaKnown RBP17.33■□□□□ 0.36
RDH13-202ENST00000396247 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.33■□□□□ 0.36
RDH13-202ENST00000396247 STK39Q9UEW8 545 aa17.33■□□□□ 0.36
RDH13-202ENST00000396247 ZC3H7BQ9UGR2 993 aaKnown RBP17.33■□□□□ 0.36
RDH13-202ENST00000396247 CCT8L1PA6NM43 557 aa17.32■□□□□ 0.36
RDH13-202ENST00000396247 ZBTB24O43167 697 aaPredicted RBP17.32■□□□□ 0.36
RDH13-202ENST00000396247 FGF18O76093 207 aa17.32■□□□□ 0.36
RDH13-202ENST00000396247 JCHAINP01591 159 aa17.32■□□□□ 0.36
RDH13-202ENST00000396247 GEMIN4P57678 1058 aaKnown RBP17.32■□□□□ 0.36
RDH13-202ENST00000396247 HTRA4P83105 476 aaPredicted RBP17.32■□□□□ 0.36
RDH13-202ENST00000396247 FPGSQ05932 587 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms