RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 USP18Q9UMW8 372 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 AP4E1Q9UPM8 1137 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 ACTL7AQ9Y615 435 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 IPO7O95373 1038 aaKnown RBP10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 MAP3K6O95382 1288 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 DESP17661 470 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 CYLC1P35663 651 aaPredicted RBP10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 ETF1P62495 437 aaKnown RBP10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 SRSF5Q13243 272 aaKnown RBP10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 LRRC32Q14392 662 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 LPAL2Q16609 132 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 FUT11Q495W5 492 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 RABGAP1LQ5R372 815 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 TMEM92Q6UXU6 159 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 LINGO4Q6UY18 593 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 ARCQ7LC44 396 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 BNIPLQ7Z465 357 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 ANKS1BQ7Z6G8 1248 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 PGBD3Q8N328 593 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 SPON2Q9BUD6 331 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 CHRDQ9H2X0 955 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 NENFQ9UMX5 172 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 PCDHA13Q9Y5I0 950 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 R4GN57 208 aa10.4□□□□□ -0.74
THUMPD1-202ENST00000396083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 A0A1B0GVM2 712 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 TCAF2A6NFQ2 919 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 ATP8B1O43520 1251 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 CYP1A2P05177 515 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 GLDCP23378 1020 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 KIR2DL1P43626 348 aaPredicted RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 CXCL12P48061 93 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 GPS2Q13227 327 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 ZNF177Q13360 481 aaPredicted RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 KIAA1211LQ6NV74 962 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SERPINA13PQ6UXR4 307 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 TMEM139Q8IV31 216 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 OR7D4Q8NG98 312 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 USP33Q8TEY7 942 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 HMGB4Q8WW32 186 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 CLDN23Q96B33 292 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 LACRTQ9GZZ8 138 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 ELOVL2Q9NXB9 296 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SALL4Q9UJQ4 1053 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 VPS28Q9UK41 221 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 REXO2Q9Y3B8 237 aaKnown RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 KMT2EQ8IZD2 1858 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 OTOGLQ3ZCN5 2332 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 MACROD2A1Z1Q3 448 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 GFRA2O00451 464 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SNAP91O60641 907 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 ADAM23O75077 832 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SEC31AO94979 1220 aaKnown RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 GOT1P17174 413 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 IL12RB1P42701 662 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 DNA2P51530 1060 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 DMC1Q14565 340 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 RNF219Q5W0B1 726 aaPredicted RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 MBLAC2Q68D91 279 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 PPP1R2P3Q6NXS1 205 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 ADIPOR2Q86V24 386 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 TMTC1Q8IUR5 882 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 PRSS33Q8NF86 280 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 CELF6Q96J87 481 aaKnown RBP10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 PLA2G4CQ9UP65 541 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 KIAA1549LQ6ZVL6 1849 aa10.39□□□□□ -0.75
THUMPD1-202ENST00000396083 CBX4O00257 560 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 LATS1O95835 1130 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 EPHX1P07099 455 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 CD48P09326 243 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 TMEM253P0C7T8 217 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 HOXB2P14652 356 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 VAV1P15498 845 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 OAS2P29728 719 aaKnown RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 EIF2DP41214 584 aaKnown RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 TNNT3P45378 269 aaPredicted RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 TAS2R40P59535 323 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 ZNF234Q14588 700 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 ACCSLQ4AC99 568 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 FNDC3BQ53EP0 1204 aaKnown RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 CXorf57Q6NSI4 855 aaKnown RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 KIAA1328Q86T90 577 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 FRMD1Q8N878 549 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 LRRN4Q8WUT4 740 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 AZIN2Q96A70 460 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 RASSF4Q9H2L5 321 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 CD93Q9NPY3 652 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 FZD10Q9ULW2 581 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 MFHAS1Q9Y4C4 1052 aa10.38□□□□□ -0.75
THUMPD1-202ENST00000396083 ZNF292O60281 2723 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms