RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 KIAA1211LQ6NV74 962 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 FEM1AQ9BSK4 669 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.32
CXCL1-201ENST00000395761 KCNF1Q9H3M0 494 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 UVRAGQ9P2Y5 699 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 USP18Q9UMW8 372 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 TFR2Q9UP52 801 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 OR51B4Q9Y5P0 310 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 R4GN57 208 aa17.02■□□□□ 0.32
CXCL1-201ENST00000395761 MYO18AQ92614 2054 aaKnown RBP17.01■□□□□ 0.31
CXCL1-201ENST00000395761 CREB3O43889 395 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 MOCS3O95396 460 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 APBB3O95704 486 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 ATP5BP06576 529 aaKnown RBP17.01■□□□□ 0.31
CXCL1-201ENST00000395761 HLA-EP13747 358 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 HOXB2P14652 356 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 PRKCHP24723 683 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 HOXA6P31267 233 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 PCK1P35558 622 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 DGKEP52429 567 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 NHLH1Q02575 133 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 SEMA3BQ13214 749 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 TXNRD3NBQ6F5E7 133 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 NLRP14Q86W24 1093 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 CAMKK1Q8N5S9 505 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 NIPA2Q8N8Q9 360 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 TBC1D31Q96DN5 1066 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 MRGPRX3Q96LB0 322 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 DHX35Q9H5Z1 703 aaKnown RBP17.01■□□□□ 0.31
CXCL1-201ENST00000395761 CD248Q9HCU0 757 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 NDFIP2Q9NV92 336 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 ZSCAN32Q9NX65 697 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 INTUQ9ULD6 942 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 PLA2G4CQ9UP65 541 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 AP4E1Q9UPM8 1137 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
CXCL1-201ENST00000395761 PCDHA13Q9Y5I0 950 aa17.01■□□□□ 0.31
CXCL1-201ENST00000395761 A0A0D9SEW6 157 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 NPC1O15118 1278 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 RHOCP08134 193 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 RHOQP17081 205 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 OR1E1P30953 314 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 OXCT1P55809 520 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 SLC12A1Q13621 1099 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 SPA17Q15506 151 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 FNDC3BQ53EP0 1204 aaKnown RBP17■□□□□ 0.31
CXCL1-201ENST00000395761 KCNT1Q5JUK3 1230 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 ANO7Q6IWH7 933 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 SERPINA13PQ6UXR4 307 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 SETD3Q86TU7 594 aaPredicted RBP17■□□□□ 0.31
CXCL1-201ENST00000395761 ZNF366Q8N895 744 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 ZBTB44Q8NCP5 570 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 MYO19Q96H55 970 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 ZNF830Q96NB3 372 aaPredicted RBP17■□□□□ 0.31
CXCL1-201ENST00000395761 KCTD15Q96SI1 283 aaPredicted RBP17■□□□□ 0.31
CXCL1-201ENST00000395761 PHOX2BQ99453 314 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 FAM126AQ9BYI3 521 aaPredicted RBP17■□□□□ 0.31
CXCL1-201ENST00000395761 MUC3BQ9H195 1237 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 IRF2BPLQ9H1B7 796 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 TMEM245Q9H330 911 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 MTG2Q9H4K7 406 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 ZWILCHQ9H900 591 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 SLCO3A1Q9UIG8 710 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 ERVW-1Q9UQF0 538 aa17■□□□□ 0.31
CXCL1-201ENST00000395761 TCRBV21S2A2A0A5A6 115 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 TMEM110-MUSTN1A8MSY1 372 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 PROSCO94903 275 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 ASLP04424 464 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 EPHB2P29323 1055 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 NRLP54845 237 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 KRT83P78385 493 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 ECT2LQ008S8 904 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 SLC25A11Q02978 314 aaKnown RBP16.99■□□□□ 0.31
CXCL1-201ENST00000395761 SRSF5Q13243 272 aaKnown RBP16.99■□□□□ 0.31
CXCL1-201ENST00000395761 SMTNL2Q2TAL5 461 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 C6orf118Q5T5N4 469 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 WDR5BQ86VZ2 330 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 LONP2Q86WA8 852 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 RASSF3Q86WH2 238 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 MDGA1Q8NFP4 955 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 OR7D4Q8NG98 312 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 HMGB4Q8WW32 186 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 RPL10LQ96L21 214 aaKnown RBP16.99■□□□□ 0.31
CXCL1-201ENST00000395761 PSMB7Q99436 277 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 EPAS1Q99814 870 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 POLMQ9NP87 494 aaPredicted RBP16.99■□□□□ 0.31
CXCL1-201ENST00000395761 TMEM248Q9NWD8 314 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 EBF1Q9UH73 591 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 VPS28Q9UK41 221 aa16.99■□□□□ 0.31
CXCL1-201ENST00000395761 REXO2Q9Y3B8 237 aaKnown RBP16.99■□□□□ 0.31
CXCL1-201ENST00000395761 ILVBLA1L0T0 632 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 AXIN1O15169 862 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 HRO43593 1189 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 SNAP91O60641 907 aa16.98■□□□□ 0.31
CXCL1-201ENST00000395761 LILRB5O75023 590 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms