RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 UBA3Q8TBC4 463 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 ARHGEF26Q96DR7 871 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 MYRFLQ96LU7 910 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 SYT15Q9BQS2 421 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 ACBD6Q9BR61 282 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 DPEP3Q9H4B8 488 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 SYNCQ9H7C4 482 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 MRPL47Q9HD33 250 aaKnown RBP11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 FAM49BQ9NUQ9 324 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 SALL4Q9UJQ4 1053 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 STRIP2Q9ULQ0 834 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 NME7Q9Y5B8 376 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 PCDHB5Q9Y5E4 795 aa11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 UBR5O95071 2799 aaPredicted RBP11.49□□□□□ -0.57
VTI1BP2-201ENST00000394154 A0A1W2PQF6 199 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 FAM170AA1A519 330 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 BCAT2O15382 392 aaPredicted RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MTA2O94776 668 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 ADH1CP00326 375 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 CDK4P11802 303 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 HDCP19113 662 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 ACAT1P24752 427 aaKnown RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 NTSR1P30989 418 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 ACTN2P35609 894 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 GPD2P43304 727 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 GPR15P49685 360 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 BCAT1P54687 386 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 HADHBP55084 474 aaKnown RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 TSPY1Q01534 308 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 BNC1Q01954 994 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MAPRE1Q15691 268 aaKnown RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 INAVAQ3KP66 663 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MDH1BQ5I0G3 518 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 BROXQ5VW32 411 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 PRICKLE2Q7Z3G6 844 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 LRRTM3Q86VH5 581 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 C12orf40Q86WS4 652 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 DCP1BQ8IZD4 617 aaKnown RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 ADGRG2Q8IZP9 1017 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 IPO4Q8TEX9 1081 aaKnown RBP11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 UBE2Q2Q8WVN8 375 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 C18orf8Q96DM3 657 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MED8Q96G25 268 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MED10Q9BTT4 135 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 NUP85Q9BW27 656 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 MIR1-1HGQ9H1L0 117 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 PARVAQ9NVD7 372 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 PCDHGA1Q9Y5H4 931 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 SCINQ9Y6U3 715 aa11.48□□□□□ -0.57
VTI1BP2-201ENST00000394154 C2orf78A6NCI8 922 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 TBC1D3BA6NDS4 549 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 LEFTY2O00292 366 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 HCRTO43612 131 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 ATP2C2O75185 946 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PALMO75781 387 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 ADH5P11766 374 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CCDC130P13994 396 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PFKLP17858 780 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 RRM1P23921 792 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 ADORA2BP29275 332 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CD6P30203 668 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PSMC1P62191 440 aaKnown RBP11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 BST2Q10589 180 aaKnown RBP11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PTP4A2Q12974 167 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 PHTF2Q8N3S3 785 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 MYCBPAPQ8TBZ2 947 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 ZNF564Q8TBZ8 553 aaPredicted RBP11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 SLC2A14Q8TDB8 520 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 STK32AQ8WU08 396 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 LGMNQ99538 433 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 DUSP16Q9BY84 665 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 OSGEPQ9NPF4 335 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 ST7Q9NRC1 585 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 GMIPQ9P107 970 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 FTSJ1Q9UET6 329 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 CAPN6Q9Y6Q1 641 aa11.47□□□□□ -0.57
VTI1BP2-201ENST00000394154 MYO9AB2RTY4 2548 aa11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 GRID2IPA4D2P6 1211 aa11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 PCDHGA12O60330 932 aa11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 BRINP1O60477 761 aa11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 URI1O94763 535 aaPredicted RBP11.46□□□□□ -0.57
VTI1BP2-201ENST00000394154 NCAM1P13591 858 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms