RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 KIAA1024Q9UPX6 916 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TMEM5Q9Y2B1 443 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PCDHGA8Q9Y5G5 932 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TOPAZ1Q8N9V7 1692 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PNMA8CA0A1B0GUJ8 204 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF701M0R085 212 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 DDX39AO00148 427 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 COX10Q12887 443 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 NFATC3Q12968 1075 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 NFE2L1Q14494 772 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 MTX3Q5HYI7 312 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 TTC39BQ5VTQ0 682 aaPredicted RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 BBS7Q8IWZ6 715 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 DDIASQ8IXT1 998 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZCCHC9Q8N567 271 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ANKLE1Q8NAG6 615 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF555Q8NEP9 628 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 RIN3Q8TB24 985 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 DEPDC1BQ8WUY9 529 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 PTCD2Q8WV60 388 aaKnown RBP7.78□□□□□ -1.16
VTI1A-201ENST00000393077 RORBQ92753 470 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 CRAMP1Q96RY5 1269 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 MTMR12Q9C0I1 747 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 FAM105AQ9NUU6 356 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
VTI1A-201ENST00000393077 KDM3AQ9Y4C1 1321 aa7.77□□□□□ -1.16
VTI1A-201ENST00000393077 PTGES3LE9PB15 166 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 H3BMQ9 156 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 STMND1H3BQB6 276 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 POLR1CO15160 346 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ATE1O95260 518 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TDP2O95551 362 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RALAP11233 206 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PSKH1P11801 424 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PON1P27169 355 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RCAN1P53805 252 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SLC18A1P54219 525 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 BNIP2Q12982 314 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SEMA3AQ14563 771 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 STILQ15468 1287 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 DLG2Q15700 870 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TBCELQ5QJ74 424 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ARHGEF16Q5VV41 709 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 KIAA0408Q6ZU52 694 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 CCDC149Q6ZUS6 474 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SHCBP1Q8NEM2 672 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 MCFD2Q8NI22 146 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ADAMTS16Q8TE57 1224 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ARHGEF26Q96DR7 871 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SCYL1Q96KG9 808 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 CCDC17Q96LX7 622 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 COG8Q96MW5 612 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 NUAK2Q9H093 628 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 NOL11Q9H8H0 719 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PTBP2Q9UKA9 531 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PCDHA12Q9UN75 941 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 E5RI56 91 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FASP25445 335 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PSMB9P28065 219 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ADSSP30520 456 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SLC18A2Q05940 514 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SLC13A2Q13183 592 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 CCNIQ14094 377 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 GK3PQ14409 553 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 UBAP2Q5T6F2 1119 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 C11orf63Q6NUN7 778 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 LAYNQ6UX15 382 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 MYCT1Q8N699 235 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ANKRD53Q8N9V6 530 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ETNPPLQ8TBG4 499 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TBCKQ8TEA7 893 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 AKAP1Q92667 903 aaKnown RBP eCLIP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 NAP1L4Q99733 375 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 C9orf16Q9BUW7 83 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 CLEC4MQ9H2X3 399 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 EPS8L2Q9H6S3 715 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 LRRC19Q9H756 370 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 GRID1Q9ULK0 1009 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 UGT2A1Q9Y4X1 527 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TMEM191CA6NGB0 347 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PI4K2BG5E9Z4 385 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PLD2O14939 933 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SULT1B1O43704 296 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FKBP9O95302 570 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 GH2P01242 217 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 MYL4P12829 197 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PRKCAP17252 672 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PSMA4P25789 261 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 GARSP41250 739 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RPS3AP61247 264 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RAB39AQ14964 217 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 UBE2SQ16763 222 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 PLEKHG4Q58EX7 1191 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 BSPRYQ5W0U4 402 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TAF2Q6P1X5 1199 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms