RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TBL1YQ9BQ87 522 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 DUSP12Q9UNI6 340 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 FAM220BPB1ANY3 271 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 SEC22BO75396 215 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 CALCAP01258 141 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ZNF286BP0CG31 522 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 OR1E1P30953 314 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 PBX1P40424 430 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 CXCL9Q07325 125 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 MAPK11Q15759 364 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 BBS12Q6ZW61 710 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 C19orf18Q8NEA5 215 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 FBXO44Q9H4M3 255 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 MIEF1Q9NQG6 463 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ENTPD7Q9NQZ7 604 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 ZMYND8Q9ULU4 1186 aaPredicted RBP13.36□□□□□ -0.27
LCA5-202ENST00000392959 DOLKQ9UPQ8 538 aa13.36□□□□□ -0.27
LCA5-202ENST00000392959 PCNAP12004 261 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ATP4AP20648 1035 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 TTKP33981 857 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 RFX3P48380 749 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 GRIK4Q16099 956 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 MILR1Q7Z6M3 343 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PSTKQ8IV42 348 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 FBXW8Q8N3Y1 598 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 SMARCD1Q96GM5 515 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 SERPINB11Q96P15 392 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PRDM16Q9HAZ2 1276 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ITGAVP06756 1048 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ITGB6P18564 788 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 MMP13P45452 471 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 NEK3P51956 506 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 CHN2P52757 468 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 INAQ16352 499 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 TMC5Q6UXY8 1006 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ALG3Q92685 438 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 C6orf62Q9GZU0 229 aaPredicted RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 PORCNQ9H237 461 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 POPDC2Q9HBU9 364 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 CAPN10Q9HC96 672 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 SPON1Q9HCB6 807 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 RPL26L1Q9UNX3 145 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PXDNQ92626 1479 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 BTN3A1O00481 513 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 LTFP02788 710 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 RPLP2P05387 115 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 OAZ1P54368 228 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 FOXR2Q6PJQ5 311 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 UNC5AQ6ZN44 842 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ARCQ7LC44 396 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ZNF614Q8N883 585 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 RNFT2Q96EX2 444 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 CERS2Q96G23 380 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 MRPS26Q9BYN8 205 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 KRCC1Q9NPI7 259 aaPredicted RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 TLR8Q9NR97 1041 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 RNF225M0QZC1 329 aaPredicted RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 LBPP18428 481 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PSMB4P28070 264 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 GSTT1P30711 240 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 CENPAP49450 140 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 SERPINH1P50454 418 aaKnown RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 GTF2A2P52657 109 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ZNF143P52747 638 aaPredicted RBP13.35□□□□□ -0.27
LCA5-202ENST00000392959 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 OR52K1Q8NGK4 314 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PWWP2AQ96N64 755 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 ANAPC2Q9UJX6 822 aa13.35□□□□□ -0.27
LCA5-202ENST00000392959 PNMA8CA0A1B0GUJ8 204 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 PPP2R1BP30154 601 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 GSSP48637 474 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TTC27Q6P3X3 843 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 CHMP1BQ7LBR1 199 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TTC7BQ86TV6 843 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 WNT8BQ93098 351 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 RNF157Q96PX1 679 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 TRPC4Q9UBN4 977 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 SPACA6W5XKT8 324 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
LCA5-202ENST00000392959 CYP3A7-CYP3A51PA0A087WV96 503 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 MEIS2O14770 477 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 ANXA6P08133 673 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 GLRA2P23416 452 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 CYP3A7P24462 503 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 NOS2P35228 1153 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 MMP14P50281 582 aa13.34□□□□□ -0.27
LCA5-202ENST00000392959 CRADDP78560 199 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms