RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ANXA11P50995 505 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 MAD2L1Q13257 205 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 DNAAF2Q9NVR5 837 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SEPHS1P49903 392 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 LIN52Q52LA3 116 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 INO80DQ53TQ3 878 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 DALRD3Q5D0E6 543 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 EFCAB12Q6NXP0 572 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 FBXO39Q8N4B4 442 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 TAS1R2Q8TE23 839 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 KATNAL1Q9BW62 490 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 TOR3AQ9H497 397 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 RGSL1A5PLK6 1076 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 LYPLA1O75608 230 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 CYBBP04839 570 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 CLK2P49760 499 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 CDK7P50613 346 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 ITGA7Q13683 1181 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 FAM131AQ6UXB0 335 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 RCN3Q96D15 328 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 TCF12Q99081 682 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SH3BP4Q9P0V3 963 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 TRPC4Q9UBN4 977 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 NDUFB5O43674 189 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 ANXA6P08133 673 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 PTSQ03393 145 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SDE2Q6IQ49 451 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 KCNH7Q9NS40 1196 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 GSC2O15499 205 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SNRPB2P08579 225 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 MTMR2Q13614 643 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 C10orf120Q5SQS8 335 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 FAM9CQ8IZT9 166 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 EIF1ADQ8N9N8 165 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 PIWIL2Q8TC59 973 aaKnown RBP16.43■□□□□ 0.22
SHANK1-204ENST00000391814 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
SHANK1-204ENST00000391814 CYP27B1O15528 508 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NPR3P17342 541 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 MSX2P35548 267 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-204ENST00000391814 SPP2Q13103 211 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-204ENST00000391814 SFRP1Q8N474 314 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 GANQ9H2C0 597 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 TAS2R14Q9NYV8 317 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NDUFB10O96000 172 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PRLP01236 227 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 ABCG1P45844 678 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 ACLYP53396 1101 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 DPYSQ14117 519 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PHKG1Q16816 387 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PAGE2BQ5JRK9 111 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NPNTQ6UXI9 565 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 DNAJB14Q8TBM8 379 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PHF12Q96QT6 1004 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NT5MQ9NPB1 228 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 VDRP11473 427 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 TYSND1Q2T9J0 566 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 MICALL2Q8IY33 904 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 TBATAQ96M53 351 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 TMEM138Q9NPI0 162 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 CLN6Q9NWW5 311 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 ERAP1Q9NZ08 941 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 MAGEB16A2A368 324 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 CAPN8A6NHC0 703 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 KPNA1P52294 538 aaPredicted RBP16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PMF1Q6P1K2 205 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 FAM47BQ8NA70 645 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 MED8Q96G25 268 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NOL11Q9H8H0 719 aaKnown RBP16.42■□□□□ 0.22
SHANK1-204ENST00000391814 MADDQ8WXG6 1647 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 A0A0B4J269 797 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PIAS1O75925 651 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 CST1P01037 141 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 JCHAINP01591 159 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 PSMA3P25788 255 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 IDH2P48735 452 aaKnown RBP16.42■□□□□ 0.22
SHANK1-204ENST00000391814 SLC47A1Q96FL8 570 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 B3GALT6Q96L58 329 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 NPAS2Q99743 824 aa16.42■□□□□ 0.22
SHANK1-204ENST00000391814 C21orf2O43822 256 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 HSF2Q03933 536 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ERAP2Q6P179 960 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 KLHL24Q6TFL4 600 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 GATAD2AQ86YP4 633 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TBL1YQ9BQ87 522 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 CDHR5Q9HBB8 845 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 PAICSP22234 425 aaKnown RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 NOS3P29474 1203 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms