RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TPMTP51580 245 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 CDH4P55283 916 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 OXCT1P55809 520 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 RPS14P62263 151 aaKnown RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 ECT2LQ008S8 904 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 NRG1Q02297 640 aaPredicted RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 CREB5Q02930 508 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 C15orf59Q2T9L4 293 aaPredicted RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 ALFQ53S48 1182 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 C9orf64Q5T6V5 341 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SH3PXD2AQ5TCZ1 1133 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 PHLDB2Q86SQ0 1253 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SYT12Q8IV01 421 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC41A1Q8IVJ1 513 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 CCDC117Q8IWD4 279 aaPredicted RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 MCOLN2Q8IZK6 566 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 VCPIP1Q96JH7 1222 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SIK2Q9H0K1 926 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 OSBPL2Q9H1P3 480 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 RSPH9Q9H1X1 276 aaPredicted RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 SMOC1Q9H4F8 434 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 TMEM74BQ9NUR3 256 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 TAS2R14Q9NYV8 317 aa11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 EVLQ9UI08 416 aaPredicted RBP11.73□□□□□ -0.53
IGHV4-28-201ENST00000390612 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 A0A1W2PQJ5 194 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 TARSL2A2RTX5 802 aaKnown RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 C10orf142B7Z368 130 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC30A4O14863 429 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 MOCS3O95396 460 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 SERPINC1P01008 464 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 GZMAP12544 262 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 TNFAIP3P21580 790 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 CD6P30203 668 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 SDC4P31431 198 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 HOXD12P35452 270 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 HDAC4P56524 1084 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 ATP11AP98196 1134 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 RPL6Q02878 288 aaKnown RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZBTB16Q05516 673 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 SULT2A1Q06520 285 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF177Q13360 481 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF571Q7Z3V5 609 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 CYP2U1Q7Z449 544 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 SETD3Q86TU7 594 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 CADM4Q8NFZ8 388 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 NETO1Q8TDF5 533 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 DNASE2BQ8WZ79 361 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 FAM129BQ96TA1 746 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 PSMB7Q99436 277 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 MTG2Q9H4K7 406 aa11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 PPARGC1AQ9UBK2 798 aaKnown RBP11.72□□□□□ -0.53
IGHV4-28-201ENST00000390612 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 LNP1A1A4G5 178 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 TTC34A8MYJ7 566 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PATE3B3GLJ2 98 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 E9PAM4 449 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 DDX3XO00571 662 aaKnown RBP eCLIP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ATP9BO43861 1147 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SIN3BO75182 1162 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ITPKAP23677 461 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 OXTRP30559 389 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 DPP6P42658 865 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 STK19P49842 368 aaPredicted RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF143P52747 638 aaPredicted RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 UBASH3AP57075 661 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ST8SIA6P61647 398 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 RPL7AP62424 266 aaKnown RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF33AQ06730 810 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SCAPQ12770 1279 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ASIC2Q16515 512 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SFMBT2Q5VUG0 894 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 LYSMD4Q5XG99 296 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 HGSNATQ68CP4 663 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 TCEAL6Q6IPX3 200 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PLEKHA7Q6IQ23 1121 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC23A3Q6PIS1 610 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 ERMP1Q7Z2K6 904 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PIGKQ92643 395 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SYN2Q92777 582 aaPredicted RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 TCEAL3Q969E4 200 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 NTAN1Q96AB6 310 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 TOE1Q96GM8 510 aaKnown RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 RPL10LQ96L21 214 aaKnown RBP11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PPP1R9BQ96SB3 815 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 RTKNQ9BST9 563 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.53
IGHV4-28-201ENST00000390612 HAUS4Q9H6D7 363 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms