RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 TMEM270Q6UE05 265 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 XKR5Q6UX68 686 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CYHR1Q6ZMK1 362 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FAM196AQ6ZSG2 479 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SLC16A12Q6ZSM3 486 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CHSY3Q70JA7 882 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MIER3Q7Z3K6 550 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SPRED1Q7Z699 444 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GTF2IRD2Q86UP8 949 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 IGFN1Q86VF2 1251 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 XYLT1Q86Y38 959 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 C10orf107Q8IVU9 208 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 BRSK2Q8IWQ3 736 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 KLHDC8BQ8IXV7 354 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 THNSL1Q8IYQ7 743 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NDUFAF2Q8N183 169 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PLD6Q8N2A8 252 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PELI3Q8N2H9 469 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MFSD4AQ8N468 514 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TAB3Q8N5C8 712 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF781Q8N8C0 355 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ANKFN1Q8N957 763 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SCAIQ8N9R8 606 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF784Q8NCA9 323 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF420Q8TAQ5 688 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PDCD6IPQ8WUM4 868 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 C17orf50Q8WW18 174 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PRPF31Q8WWY3 499 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 STARD8Q92502 1023 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TOP1MTQ969P6 601 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TP53INP1Q96A56 240 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FKBP10Q96AY3 582 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 RCN3Q96D15 328 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CMTM5Q96DZ9 223 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MAELQ96JY0 434 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CNDP2Q96KP4 475 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 BTN2A3PQ96KV6 586 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 LRGUKQ96M69 825 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZDHHC15Q96MV8 337 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CSF3RQ99062 836 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 MPHOSPH6Q99547 160 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 CGRRF1Q99675 332 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 EBNA1BP2Q99848 306 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SGIP1Q9BQI5 828 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FERMT1Q9BQL6 677 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 HEPHQ9BQS7 1158 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF577Q9BSK1 485 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 HAUS8Q9BT25 410 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GATA5Q9BWX5 397 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 C1QTNF1Q9BXJ1 281 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SLC4A5Q9BY07 1137 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 IMPG2Q9BZV3 1241 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PDGFDQ9GZP0 370 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NAA50Q9GZZ1 169 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 XYLT2Q9H1B5 865 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GBA3Q9H227 469 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 Q9H521 79 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 FAM96AQ9H5X1 160 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 RMI1Q9H9A7 625 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 COPS7BQ9H9Q2 264 aaPredicted RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NANOGQ9H9S0 305 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SPON1Q9HCB6 807 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 XPNPEP3Q9NQH7 507 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TLR9Q9NR96 1032 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 KCNH7Q9NS40 1196 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TBC1D22BQ9NU19 505 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF358Q9NW07 568 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SMOXQ9NWM0 555 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 RRN3Q9NYV6 651 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TMOD2Q9NZR1 351 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM9Q9P0T7 183 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PAK5Q9P286 719 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 THEGQ9P2T0 379 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GMPR2Q9P2T1 348 aaKnown RBP3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GGA1Q9UJY5 639 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 ARHGAP26Q9UNA1 814 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 DOLKQ9UPQ8 538 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHB4Q9Y5E5 795 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHGA7Q9Y5G6 932 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHA11Q9Y5I1 949 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 SNX9Q9Y5X1 595 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 NLRC5Q86WI3 1866 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 PIKFYVEQ9Y2I7 2098 aa3.53□□□□□ -1.84
TRAV39-201ENST00000390466 COL4A5P29400 1685 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 ZNF106Q9H2Y7 1883 aaKnown RBP3.52□□□□□ -1.85
TRAV39-201ENST00000390466 MYO16Q9Y6X6 1858 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 KIAA1671Q9BY89 1806 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 ARHGEF37A1IGU5 675 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 KRBA1A5PL33 1030 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 RGSL1A5PLK6 1076 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 C2CD4BA6NLJ0 364 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 J3QRK9 145 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 FXYD1O00168 92 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 SOCS2O14508 198 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 SDHDO14521 159 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 RGS13O14921 159 aa3.52□□□□□ -1.85
TRAV39-201ENST00000390466 XPOTO43592 962 aaKnown RBP3.52□□□□□ -1.85
TRAV39-201ENST00000390466 SNAP91O60641 907 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms