RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 UBE2UQ5VVX9 321 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 TMEM270Q6UE05 265 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 CBR4Q8N4T8 237 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 CNGB3Q9NQW8 809 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 RABL2AQ9UBK7 228 aaPredicted RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 PTBP2Q9UKA9 531 aaKnown RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 COQ4Q9Y3A0 265 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 FAM155AB1AL88 458 aaPredicted RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 AURKAO14965 403 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 ADORA2AP29274 412 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 DARS2Q6PI48 645 aaKnown RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 ZNF354CQ86Y25 554 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 MPP5Q8N3R9 675 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 ZNF486Q96H40 463 aaPredicted RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 IL12RB2Q99665 862 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 HOXD1Q9GZZ0 328 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 FAM96AQ9H5X1 160 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 SOX17Q9H6I2 414 aaPredicted RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 TUFT1Q9NNX1 390 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 SCUBE2Q9NQ36 999 aa21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 DDX60LQ5H9U9 1706 aaKnown RBP21.43■■□□□ 1.02
NKX3-2-201ENST00000382438 TRIM64BA6NI03 449 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 C9IYK1 514 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 B4GAT1O43505 415 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 PPP4CP60510 307 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 DGKDQ16760 1214 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 NXNQ6DKJ4 435 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 NAPRTQ6XQN6 538 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 RFX6Q8HWS3 928 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 RP9Q8TA86 221 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 GLT1D1Q96MS3 346 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 NACC1Q96RE7 527 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 ADI1Q9BV57 179 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 RTFDC1Q9BY42 306 aaPredicted RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TRIT1Q9H3H1 467 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 PCDHGA11Q9Y5H2 935 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 DLGAP1O14490 977 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TNPO2O14787 897 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 GCATO75600 419 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 IL18RAPO95256 599 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 MAP3K6O95382 1288 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 ALDOAP04075 364 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TGM1P22735 817 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TTKP33981 857 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 GTF2IP78347 998 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 KRT76Q01546 638 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 SLC27A3Q5K4L6 730 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 PADI6Q6TGC4 694 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 ANKRD13BQ86YJ7 626 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 CXorf38Q8TB03 319 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 SPATA18Q8TC71 538 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 LPGAT1Q92604 370 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 APBA2Q99767 749 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 C1orf112Q9NSG2 853 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TXNDC16Q9P2K2 825 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 VPS28Q9UK41 221 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 CNOT6Q9ULM6 557 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 PRKCGP05129 697 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 IL1R2P27930 398 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 GNA15P30679 374 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 MAPRE1Q15691 268 aaKnown RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 HAUS6Q7Z4H7 955 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 ABRAQ8N0Z2 381 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TNIP2Q8NFZ5 429 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 NACC2Q96BF6 587 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 WDR18Q9BV38 432 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 GDAP2Q9NXN4 497 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 TRPC5Q9UL62 973 aaPredicted RBP21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 PCDHGA8Q9Y5G5 932 aa21.42■■□□□ 1.02
NKX3-2-201ENST00000382438 LOC105371267A0A1B0GV96 52 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 ZNF839A8K0R7 811 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 DDX39AO00148 427 aaKnown RBP21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 APRTP07741 180 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 OSBPP22059 807 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 CXCR2P25025 360 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 AP3B2Q13367 1082 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 PLCL1Q15111 1095 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 SHROOM1Q2M3G4 852 aaPredicted RBP21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 NAT16Q8N8M0 369 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 FANCEQ9HB96 536 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 COPG2Q9UBF2 871 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 IPO11Q9UI26 975 aaKnown RBP21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 AP4E1Q9UPM8 1137 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 CCR10P46092 362 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 HARS2P49590 506 aaKnown RBP21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 RHDQ02161 417 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 TAF5Q15542 800 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 SIGIRRQ6IA17 410 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 C4orf22Q6V702 233 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 CAND1Q86VP6 1230 aaKnown RBP21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 SLC38A6Q8IZM9 456 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 SUN5Q8TC36 379 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 PCSK1NQ9UHG2 260 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 TCAF1Q9Y4C2 921 aa21.41■■□□□ 1.02
NKX3-2-201ENST00000382438 TRIM38O00635 465 aa21.4■■□□□ 1.02
NKX3-2-201ENST00000382438 TPST1O60507 370 aa21.4■■□□□ 1.02
NKX3-2-201ENST00000382438 MYF6P23409 242 aa21.4■■□□□ 1.02
NKX3-2-201ENST00000382438 EEF1B2P24534 225 aaKnown RBP21.4■■□□□ 1.02
NKX3-2-201ENST00000382438 SREBF1P36956 1147 aa21.4■■□□□ 1.02
NKX3-2-201ENST00000382438 MERTKQ12866 999 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms