RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 PRKAA2P54646 552 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 PMS2P3Q13401 168 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 RAB39AQ14964 217 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ATG16L1Q676U5 607 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SV2BQ7L1I2 683 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF354CQ86Y25 554 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 DDX60Q8IY21 1712 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ZNF786Q8N393 782 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 IL12RB2Q99665 862 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 POLR1BQ9H9Y6 1135 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 TNS1Q9HBL0 1735 aaKnown RBP9.57□□□□□ -0.88
PTPRA-204ENST00000380393 KBTBD4Q9NVX7 518 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 ENOPH1Q9UHY7 261 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 SLC24A2Q9UI40 661 aa9.57□□□□□ -0.88
PTPRA-204ENST00000380393 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CENPXA8MT69 81 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 USP17L21D6R901 530 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SPOPO43791 374 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TYROBPO43914 113 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CALB1P05937 261 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PGK2P07205 417 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 GRIA3P42263 894 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 MYL6P60660 151 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 MRPS22P82650 360 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TXNL4AP83876 142 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 RUNX1T1Q06455 604 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ENPEPQ07075 957 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 UBAP2LQ14157 1087 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SEC23AQ15436 765 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 BEND5Q7L4P6 421 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ZCCHC7Q8N3Z6 543 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ABHD11Q8NFV4 315 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TNFRSF25Q93038 417 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PIP5K1AQ99755 562 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 BRD7Q9NPI1 651 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 FAM105AQ9NUU6 356 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PKD2L2Q9NZM6 624 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 FNIP2Q9P278 1114 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ACAD8Q9UKU7 415 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 MRPS7Q9Y2R9 242 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 BCORQ6W2J9 1755 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TRPC5OSA6NMA1 111 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PLK4O00444 970 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 DLGAP3O95886 979 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TP53P04637 393 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 GZMAP12544 262 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SERPINH1P50454 418 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ARHGDIBP52566 201 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TROAPQ12815 778 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 HERC3Q15034 1050 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 LEXMQ3ZCV2 418 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 FAM26DQ5JW98 314 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 LRRTM3Q86VH5 581 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PDPRQ8NCN5 879 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SHCBP1Q8NEM2 672 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ALG3Q92685 438 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 JMJD4Q9H9V9 463 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 XPNPEP1Q9NQW7 623 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 WHRNQ9P202 907 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SUCOQ9UBS9 1254 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TNRC6CQ9HCJ0 1690 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 IFI30P13284 250 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PLS3P13797 630 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CALML3P27482 149 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 RPL9P32969 192 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ACOT2P49753 483 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CLCNKBP51801 687 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ITGA8P53708 1063 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SLC12A2P55011 1212 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 KRT17Q04695 432 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 FUT2Q10981 343 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CSTF3Q12996 717 aaKnown RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SLC13A2Q13183 592 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TBCCQ15814 346 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ZFP69Q49AA0 526 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SLC9A4Q6AI14 798 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 TRIM72Q6ZMU5 477 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PLEKHM3Q6ZWE6 761 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 DEFB107AQ8IZN7 70 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 ARL6IP6Q8N6S5 226 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 GALNT11Q8NCW6 608 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 OSBPL11Q9BXB4 747 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 NPLQ9BXD5 320 aaPredicted RBP9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SLA2Q9H6Q3 261 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 CPNE5Q9HCH3 593 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 DIABLOQ9NR28 239 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 PLSCR3Q9NRY6 295 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 RIPK3Q9Y572 518 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 SPEF2Q9C093 1822 aa9.56□□□□□ -0.88
PTPRA-204ENST00000380393 RAD51BO15315 384 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 TRAPPC10P48553 1259 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 NPEPPSP55786 919 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 GSTO1P78417 241 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 GPBP1Q86WP2 473 aa9.55□□□□□ -0.88
PTPRA-204ENST00000380393 HID1Q8IV36 788 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms