RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SIGLEC10Q96LC7 697 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 CNTN3Q9P232 1028 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ZBTB42B2RXF5 422 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 CLDN5O00501 218 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ADAM23O75077 832 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 MT-CO1P00395 513 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 NELFEP18615 380 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 PSMB4P28070 264 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 FDFT1P37268 417 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 AP3M2P53677 418 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC18A1P54219 525 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 PKNOX1P55347 436 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 GHRHRQ02643 423 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 CCNIQ14094 377 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 PDK1Q15118 436 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SOWAHAQ2M3V2 549 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SH2D5Q6ZV89 423 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 AGAP2Q99490 1192 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 GPAMQ9HCL2 828 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ARHGAP10A1A4S6 786 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 VDRP11473 427 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SOX11P35716 441 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 MBTD1Q05BQ5 628 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 CD300CQ08708 224 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 MAP3K21Q5TCX8 1036 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC2A7Q6PXP3 512 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 Q6ZNX1 250 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF410Q86VK4 478 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 SYBUQ9NX95 663 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 RBMX2Q9Y388 322 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 DTNAQ9Y4J8 743 aa12.75□□□□□ -0.37
PRPF40B-202ENST00000380281 CHADO15335 359 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 ALDOAP04075 364 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 PIM1P11309 404 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 CDH2P19022 906 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 CYTH1Q15438 398 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 PPP1R2P3Q6NXS1 205 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 ZBTB46Q86UZ6 589 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 GALNT4Q8N4A0 578 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 FAM156AQ8NDB6 213 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 OR52K1Q8NGK4 314 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 ZNF669Q96BR6 464 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 MAML3Q96JK9 1138 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 PPP1R10Q96QC0 940 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 LHX5Q9H2C1 402 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 B4GALT4O60513 344 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 GABBR2O75899 941 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 HSPA4LO95757 839 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 ARRB2P32121 409 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 CDH5P33151 784 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 NDUFV1P49821 464 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 IRF9Q00978 393 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 PPM1LQ5SGD2 360 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 CHSY1Q86X52 802 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 CPNE9Q8IYJ1 553 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 SLC7A5P1Q8MH63 180 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 LAMA2P24043 3122 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-202ENST00000380281 SH3PXD2BA1X283 911 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 DNAJA2O60884 412 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PFKMP08237 780 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 P4HA1P13674 534 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 KCTD2Q14681 263 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SURF1Q15526 300 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 CNGA3Q16281 694 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 DNAL1Q4LDG9 190 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 BOLA3Q53S33 107 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 C6orf52Q5T4I8 152 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ITPRIPL1Q6GPH6 555 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ACVR1CQ8NER5 493 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 PIWIL2Q8TC59 973 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TBCBQ99426 244 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 DCUN1D5Q9BTE7 237 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 RRN3Q9NYV6 651 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 TIMM13Q9Y5L4 95 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 SIN3BO75182 1162 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 IDO1P14902 403 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 ARSAP15289 507 aa12.73□□□□□ -0.37
PRPF40B-202ENST00000380281 IGFBP6P24592 240 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms