RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 C5orf60A6NFR6 353 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF197O14709 1029 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 KCNN4O15554 427 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ERLIN1O75477 346 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ZSCAN5DPP0CG00 497 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ETS1P14921 441 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 WEE1P30291 646 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 MAPKAPK2P49137 400 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 NDST2P52849 883 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 NRLP54845 237 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 TRIP13Q15645 432 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 TCEAL5Q5H9L2 206 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 BEND6Q5SZJ8 279 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 HEATR6Q6AI08 1181 aaKnown RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 EMBQ6PCB8 327 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 RHBDF2Q6PJF5 856 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 B4GALNT4Q76KP1 1039 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 CPXM2Q8N436 756 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 CCDC33Q8N5R6 958 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 NETO2Q8NC67 525 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ZSCAN18Q8TBC5 510 aaPredicted RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 HTR3CQ8WXA8 447 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 SMG7Q92540 1137 aaKnown RBP12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ART4Q93070 314 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 TSGA13Q96PP4 275 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ADAM7Q9H2U9 754 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF510Q9Y2H8 683 aa12.31□□□□□ -0.44
EXOSC9-202ENST00000379663 LEFTY2O00292 366 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 GCATO75600 419 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 IFNB1P01574 187 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CEBPBP17676 345 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 ITIH2P19823 946 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 AVPR1AP37288 418 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CDH4P55283 916 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 USP4Q13107 963 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 RABGAP1LQ5R372 815 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 RNF43Q68DV7 783 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 RFWD3Q6PCD5 774 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 TMC5Q6UXY8 1006 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CHST9Q7L1S5 443 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 TFAP2DQ7Z6R9 452 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 LRRC49Q8IUZ0 686 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 C12orf76Q8N812 135 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 RIN3Q8TB24 985 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 FBXO25Q8TCJ0 367 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 LRRN4Q8WUT4 740 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 IFT81Q8WYA0 676 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 FATE1Q969F0 183 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 P2RY11Q96G91 374 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CELF6Q96J87 481 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 SLC39A8Q9C0K1 460 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 LSM7Q9UK45 103 aaKnown RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 CCL26Q9Y258 94 aa12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
EXOSC9-202ENST00000379663 A0A1B0GVM2 712 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 E2F8A0AVK6 867 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 TCAF2A6NFQ2 919 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 LINC01565O15544 149 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 MAFKO60675 156 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 PRAMEF12O95522 483 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 POU3F3P20264 500 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 VPS41P49754 854 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 SGSHP51688 502 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 GPS1Q13098 491 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF77Q15935 545 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 LCE2DQ5TA82 110 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 RNASEH2BQ5TBB1 312 aaKnown RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 ANKRD54Q6NXT1 300 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 CIR1Q86X95 450 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 BBOF1Q8ND07 529 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 ITFG1Q8TB96 612 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 TTYH1Q9H313 450 aaPredicted RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 PIDD1Q9HB75 910 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 ARFGAP3Q9NP61 516 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 PAK5Q9P286 719 aa12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
EXOSC9-202ENST00000379663 A0A0A0MRY4 1105 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 NDC80O14777 642 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 MTSS1O43312 755 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CLDN11O75508 207 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CCNCP24863 283 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ADCY8P40145 1251 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms