RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ABCF3Q9NUQ8 709 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TMEM161AQ9NX61 479 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 A0A1W2PQ45 241 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 A0A1W2PQY0 241 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 MAGEB16A2A368 324 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 WDR27A2RRH5 827 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM43BA6NCK2 446 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CXorf49A8MYA2 514 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 I6L893 689 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 ATP5HO75947 161 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TGDSO95455 350 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CSH1P0DML2 217 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CSH2P0DML3 217 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CCNCP24863 283 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 ITGB8P26012 769 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CCR1P32246 355 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 GRIK1P39086 918 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 MAGEA11P43364 429 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 NPY2RP49146 381 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 RABGGTBP53611 331 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 SMAD3P84022 425 aaKnown RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 NIPAL4Q0D2K0 466 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 PRPSAP1Q14558 356 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TEX44Q53QW1 395 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TJAP1Q5JTD0 557 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CLLU1OSQ5K130 101 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CASC4Q6P4E1 433 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 RTN4RL1Q86UN2 441 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 LRRC49Q8IUZ0 686 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 KLHDC8BQ8IXV7 354 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 MPP5Q8N3R9 675 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CCDC63Q8NA47 563 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM43Q96BQ3 446 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TBC1D31Q96DN5 1066 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 OXNAD1Q96HP4 312 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 SERPINB11Q96P15 392 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 TMEM209Q96SK2 561 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 FBXO44Q9H4M3 255 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 CASS4Q9NQ75 786 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 PRDM5Q9NQX1 630 aaPredicted RBP10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 STARD7Q9NQZ5 370 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 SMYD2Q9NRG4 433 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 BFARQ9NZS9 450 aa10.73□□□□□ -0.69
POLR2J3-201ENST00000379340 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 GOLGA8RI6L899 631 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ARVCFO00192 962 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 RFPL1O75677 317 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 UBOX5O94941 541 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ITGB1P05556 798 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 SRGAP2BP0DMP2 458 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC2A3P11169 496 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 MGAT1P26572 445 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 CRHR1P34998 444 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 GRIA1P42261 906 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 MGAT5Q09328 741 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 BNIP1Q12981 228 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 BFSP2Q13515 415 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 CRYMQ14894 314 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM60Q495X7 471 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ACBD5Q5T8D3 534 aaPredicted RBP10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ARMC3Q5W041 872 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 MSANTD2Q6P1R3 559 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 TRMT10BQ6PF06 316 aaKnown RBP10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 OTOAQ7RTW8 1153 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 LINC00523Q86TU6 105 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 MON1AQ86VX9 555 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF276Q8N554 614 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 NPWQ8N729 165 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 LINC01599Q8WXQ3 324 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ARNTL2Q8WYA1 636 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 TEKT5Q96M29 485 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 FAM111AQ96PZ2 611 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 KLF6Q99612 283 aaPredicted RBP10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 OXCT2Q9BYC2 517 aaPredicted RBP10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 TBC1D13Q9NVG8 400 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 DONSONQ9NYP3 566 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC17A7Q9P2U7 560 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 ADAM28Q9UKQ2 775 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 PHF24Q9UPV7 400 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 SCML2Q9UQR0 700 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 PLLPQ9Y342 182 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 PCDHB5Q9Y5E4 795 aa10.72□□□□□ -0.69
POLR2J3-201ENST00000379340 WASH4PA8MWX3 477 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 C2CD2LO14523 706 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 BIRC5O15392 142 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 RASSF9O75901 435 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 PIAS1O75925 651 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 DDHD2O94830 711 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SELPP16109 830 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 PLA2G5P39877 138 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 OR1G1P47890 313 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SERPINB4P48594 390 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SESN2P58004 480 aaPredicted RBP10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SMARCB1Q12824 385 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 MBTPS1Q14703 1052 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC39A12Q504Y0 691 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms