RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 MRPS6P82932 125 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 NRF1Q16656 503 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PDE12Q6L8Q7 609 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 TSHZ1Q6ZSZ6 1077 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 KBTBD6Q86V97 674 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 SPATA24Q86W54 205 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 OR6Y1Q8NGX8 325 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 SIGLEC10Q96LC7 697 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 TMEM8AQ9HCN3 771 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PLLPQ9Y342 182 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PCDHGA4Q9Y5G9 962 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 DCXO43602 365 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 MLYCDO95822 493 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 RB1P06400 928 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 P4HBP07237 508 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 ITGA2BP08514 1039 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 GNA15P30679 374 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 ARFIP2P53365 341 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 DPYSL3Q14195 570 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 HIF1AQ16665 826 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 FAM47CQ5HY64 1035 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 ZNF618Q5T7W0 954 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 CCHCR1Q8TD31 782 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 ACTRT2Q8TDY3 377 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 CFAP36Q96G28 342 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 TSPAN18Q96SJ8 248 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PATJQ8NI35 1801 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 SF3B1O75533 1304 aaKnown RBP eCLIP7.55□□□□□ -1.23e-6■■■■■ 32.4
GPCPD1-201ENST00000379019 GPR182O15218 404 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 LPXNO60711 386 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PABPC4LP0CB38 370 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 CKBP12277 381 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 CCR3P51677 355 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 BASP1P80723 227 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 MRPS35P82673 323 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 POLD3Q15054 466 aaPredicted RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 CMPK2Q5EBM0 449 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 MIER3Q7Z3K6 550 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PDCD7Q8N8D1 485 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 SMC6Q96SB8 1091 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 NFKBIZQ9BYH8 718 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 S100A14Q9HCY8 104 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 TMEM30AQ9NV96 361 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 KCND2Q9NZV8 630 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
GPCPD1-201ENST00000379019 C9IYK1 514 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 E9PBE3 544 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 KLHL41O60662 606 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 OATP04181 439 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 MX2P20592 715 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 MGAT3Q09327 533 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 TAZQ16635 292 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CFAP157Q5JU67 520 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 SCUBE1Q8IWY4 988 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PCDH19Q8TAB3 1148 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 UBA3Q8TBC4 463 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 FAM81AQ8TBF8 368 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 C15orf38-AP3S2A0A0A6YYH1 394 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 ARHGEF35A5YM69 484 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 H0YCG3 227 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 KRT1P04264 644 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PIM1P11309 404 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 MIPP30301 263 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 IDH3AP50213 366 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CLCN2P51788 898 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 KPNA1P52294 538 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CRYBB1P53674 252 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 IGBP1P78318 339 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 MRPS22P82650 360 aaKnown RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 STAT4Q14765 748 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PPP1R3AQ16821 1122 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CDO1Q16878 200 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 GDF6Q6KF10 455 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 HS2ST1Q7LGA3 356 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 ARPINQ7Z6K5 226 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PPM1NQ8N819 430 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 KBTBD7Q8WVZ9 684 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 LENG8Q96PV6 779 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PSMC3IPQ9P2W1 217 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 UVRAGQ9P2Y5 699 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CDH22Q9UJ99 828 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 RALGAPA2Q2PPJ7 1873 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 KCNA5P22460 613 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CES1P23141 567 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 FSHRP23945 695 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PUS10Q3MIT2 529 aaKnown RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 FEZF2Q8TBJ5 459 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 SP7Q8TDD2 431 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 NKD2Q969F2 451 aaPredicted RBP7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 TXLNGQ9NUQ3 528 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 ACTL7BQ9Y614 415 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 CEPT1Q9Y6K0 416 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 A0A1W2PQ67 120 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 FKBP6O75344 327 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 PAX3P23760 479 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 ENTPD1P49961 510 aa7.54□□□□□ -1.2
GPCPD1-201ENST00000379019 FOLH1Q04609 750 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms