RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TRMT10BQ6PF06 316 aaKnown RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 FRA10AC1Q70Z53 315 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 AMIGO2Q86SJ2 522 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 RSPH3Q86UC2 560 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 LILRA2Q8N149 483 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 AFAP1L2Q8N4X5 818 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 HIPK4Q8NE63 616 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TAAR1Q96RJ0 339 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TRIM15Q9C019 465 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 HAPLN2Q9GZV7 340 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 C2orf40Q9H1Z8 148 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 C10orf88Q9H8K7 445 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 UGT1A7Q9HAW7 530 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 UGT1A10Q9HAW8 530 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 UGT1A8Q9HAW9 530 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 LRRC4Q9HBW1 653 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 JPH1Q9HDC5 661 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 ARMC1Q9NVT9 282 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 PCSK1NQ9UHG2 260 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 RNF11Q9Y3C5 154 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TANC1Q9C0D5 1861 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 LOC100653049A0A140TA62 436 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 AIM2O14862 343 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 KRT34O76011 436 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 MYL3P08590 195 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 MYF6P23409 242 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 VARSP26640 1264 aaKnown RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 DCKP27707 260 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 LIMK2P53671 638 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CDKL1Q00532 357 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 PTPN11Q06124 597 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CEACAM7Q14002 265 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 DPYSL2Q16555 572 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 KYAT1Q16773 422 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF667Q5HYK9 610 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 C6orf52Q5T4I8 152 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 LIPMQ5VYY2 423 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 NPNTQ6UXI9 565 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 GADL1Q6ZQY3 521 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM110Q86TL2 294 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CHPT1Q8WUD6 406 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 ZUFSPQ96AP4 578 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 SPATA13Q96N96 652 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TSNARE1Q96NA8 513 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 PEBP4Q96S96 227 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CPXM1Q96SM3 734 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 RBBP8Q99708 897 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 XYLT2Q9H1B5 865 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 OXSMQ9NWU1 459 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 TMEM216Q9P0N5 145 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 ARIH1Q9Y4X5 557 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 MAFBQ9Y5Q3 323 aaPredicted RBP8.38□□□□□ -1.07
PTPRR-203ENST00000378778 RAD54BQ9Y620 910 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 PARP14Q460N5 1801 aa8.38□□□□□ -1.07
PTPRR-203ENST00000378778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 NPHS1O60500 1241 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SNAP91O60641 907 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SERPINB7O75635 380 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CD19P15391 556 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 IL4RP24394 825 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PTPN9P43378 593 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CACNB3P54284 484 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 OXCT1P55809 520 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 RPS6P62753 249 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 GSTM4Q03013 218 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 RELAQ04206 551 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ILF2Q12905 390 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 TUBA3CQ13748 450 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PPP2R5DQ14738 602 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 SLC27A3Q5K4L6 730 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FAM102AQ5T9C2 384 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 HEATR6Q6AI08 1181 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ZYG11AQ6WRX3 759 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 NEK10Q6ZWH5 1172 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FAM83AQ86UY5 434 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 AMIGO3Q86WK7 504 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ZNF513Q8N8E2 541 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 TARS2Q9BW92 718 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FTHL17Q9BXU8 183 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 MUC13Q9H3R2 512 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 OLAHQ9NV23 265 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 FBXO40Q9UH90 709 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ANK1P16157 1881 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ERI2A8K979 691 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 G3V2L1 256 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 NOL3O60936 208 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 CST3P01034 146 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 OATP04181 439 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 MYCLP12524 364 aaPredicted RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 PDGFRAP16234 1089 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 EIF2AK2P19525 551 aaKnown RBP8.37□□□□□ -1.07
PTPRR-203ENST00000378778 GPD2P43304 727 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 ATP4BP51164 291 aa8.37□□□□□ -1.07
PTPRR-203ENST00000378778 KPNA2P52292 529 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms