RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 NCF1P14598 390 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 LRRC74AQ0VAA2 488 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 NAIF1Q69YI7 327 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 IZUMO2Q6UXV1 221 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PLEKHM3Q6ZWE6 761 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 BBS7Q8IWZ6 715 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 LENG9Q96B70 501 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 EFCAB1Q9HAE3 211 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 EXOSC4Q9NPD3 245 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 THAP1Q9NVV9 213 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 APPL1Q9UKG1 709 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PARP4Q9UKK3 1724 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 A0A1W2PPM1 405 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 TPST1O60507 370 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 USP1O94782 785 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PRKAR2AP13861 404 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PGAM1P18669 254 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PSMA4P25789 261 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 MZF1P28698 734 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 CRADDP78560 199 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 DDX39BQ13838 428 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 DEFB107AQ8IZN7 70 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF786Q8N393 782 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 SYT17Q9BSW7 474 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 SLC7A5P2Q9GIP4 190 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 VAPBO95292 243 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 CYP2C18P33260 490 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 PDK4Q16654 411 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF467Q7Z7K2 595 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 KCNMB4Q86W47 210 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 LRRC39Q96DD0 335 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 UROC1Q96N76 676 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 EPS8L2Q9H6S3 715 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
NPHP4-201ENST00000378156 LRCH1Q9Y2L9 728 aa15.31■□□□□ 0.04
NPHP4-201ENST00000378156 DUOX1Q9NRD9 1551 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 SLCO1B7G3V0H7 640 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 FKBP9O95302 570 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 SERPINE1P05121 402 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 CD52P31358 61 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 SLC45A4Q5BKX6 768 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 FKBP9P1Q75LS8 142 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 CCDC103Q8IW40 242 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 TDRD5Q8NAT2 981 aaKnown RBP15.3■□□□□ 0.04
NPHP4-201ENST00000378156 PHF21AQ96BD5 680 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 CATSPER2Q96P56 530 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 KLHL4Q9C0H6 718 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 UXTQ9UBK9 157 aaPredicted RBP15.3■□□□□ 0.04
NPHP4-201ENST00000378156 MMP8P22894 467 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 RPL9P32969 192 aaKnown RBP15.3■□□□□ 0.04
NPHP4-201ENST00000378156 RAB14P61106 215 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 LUZP2Q86TE4 346 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 STK32AQ8WU08 396 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 LPPQ93052 612 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 SNRNP25Q9BV90 132 aaKnown RBP15.3■□□□□ 0.04
NPHP4-201ENST00000378156 MAF1Q9H063 256 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 SPASTQ9UBP0 616 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 CDC25CP30307 473 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 FLT3LGP49771 235 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 TRABD2AQ86V40 505 aa15.3■□□□□ 0.04
NPHP4-201ENST00000378156 FAM237BA0A1B0GVD1 139 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 RNASEH1O60930 286 aaKnown RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ABCG1P45844 678 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF572Q7Z3I7 529 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 DPF3Q92784 378 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 MT-CO1P00395 513 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 GSNP06396 782 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 CKBP12277 381 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ZNF280AP59817 542 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ZC3H12AQ5D1E8 599 aaKnown RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 SPANXN3Q5MJ09 141 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 GRTP1Q5TC63 336 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 RNF43Q68DV7 783 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ANKRD23Q86SG2 305 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 CPNE8Q86YQ8 564 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 CLEC4DQ8WXI8 215 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 RNF157Q96PX1 679 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 SAR1AQ9NR31 198 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 TMEM161AQ9NX61 479 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 NOCTQ9UK39 431 aaKnown RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 V9GYQ6 96 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ALOX15BO15296 676 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 TPBGLP0DKB5 382 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 CHRNB2P17787 502 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 PAX3P23760 479 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 SPIRE1Q08AE8 756 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 PLD1Q13393 1074 aa15.29■□□□□ 0.04
NPHP4-201ENST00000378156 BNC2Q6ZN30 1099 aaPredicted RBP15.29■□□□□ 0.04
NPHP4-201ENST00000378156 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms