RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CCDC185Q8N715 623 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 IRGQQ8WZA9 623 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 KCTD15Q96SI1 283 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 LGMNQ99538 433 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 DPEP3Q9H4B8 488 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 CRTAMO95727 393 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 STAU1O95793 577 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 LGALS2P05162 132 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 MYL4P12829 197 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 LCP1P13796 627 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 SESN2P58004 480 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 SEMA5AQ13591 1074 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 SOWAHAQ2M3V2 549 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 TIFABQ6ZNK6 161 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 PHTF2Q8N3S3 785 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 CLMNQ96JQ2 1002 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 PRPF18Q99633 342 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 DNAJC28Q9NX36 388 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 RAB26Q9ULW5 256 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 AP4B1Q9Y6B7 739 aa16.99■□□□□ 0.31
PCDHA1-201ENST00000378133 DCXO43602 365 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ALDOAP04075 364 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ZFXP17010 805 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 GOT1P17174 413 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 NR2C2P49116 596 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 TMED1Q13445 227 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 CEP70Q8NHQ1 597 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 LRGUKQ96M69 825 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 QKIQ96PU8 341 aaKnown RBP eCLIP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 CEP41Q9BYV8 373 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 SENP6Q9GZR1 1112 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PLK2Q9NYY3 685 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PACSIN3Q9UKS6 424 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 EMCNQ9ULC0 261 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ZNF510Q9Y2H8 683 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 TPP1O14773 563 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ZNF286BP0CG31 522 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 COX4I1P13073 169 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ACAT1P24752 427 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ADORA2BP29275 332 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 GK3PQ14409 553 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 KYAT1Q16773 422 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 RARS2Q5T160 578 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 NCBP2-AS2Q69YL0 99 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 LINC01465Q8N7H1 131 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 HTR3CQ8WXA8 447 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 SERPINE1P05121 402 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PCSK6P29122 969 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 MYBPC1Q00872 1141 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 ATG14Q6ZNE5 492 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 AHI1Q8N157 1196 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 GAB3Q8WWW8 586 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 C11orf84Q9BUA3 381 aaPredicted RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 MRPL1Q9BYD6 325 aaKnown RBP16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PSAT1Q9Y617 370 aa16.98■□□□□ 0.31
PCDHA1-201ENST00000378133 PAPPA2Q9BXP8 1791 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 A0A0G2JLL6 359 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 MYOCOSA0A1B0GUC4 107 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 CCDC130P13994 396 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 PTPN9P43378 593 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 GALK1P51570 392 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 DCTN2Q13561 401 aaKnown RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 GLRA4Q5JXX5 417 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 STXBP5Q5T5C0 1151 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 PAOXQ6QHF9 649 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 PRRT2Q7Z6L0 340 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 CENPIQ92674 756 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 SORT1Q99523 831 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 GCOM2Q9BZD3 368 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 ZNF696Q9H7X3 374 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 SNTG2Q9NY99 539 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 ZNF487B1APH4 448 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 ALDH1A2O94788 518 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 FBXO21O94952 628 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 MGAT1P26572 445 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 GMPRP36959 345 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 PACS1Q6VY07 963 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 C10orf107Q8IVU9 208 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 DDI1Q8WTU0 396 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 C18orf25Q96B23 403 aaPredicted RBP16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 XPNPEP3Q9NQH7 507 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 TUBGCP4Q9UGJ1 667 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 HES2Q9Y543 173 aa16.97■□□□□ 0.31
PCDHA1-201ENST00000378133 PLIN3O60664 434 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 TRMUO75648 421 aaKnown RBP16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 CNTFP26441 200 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 SNX16P57768 344 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 COG7P83436 770 aa16.96■□□□□ 0.31
PCDHA1-201ENST00000378133 PPM1JQ5JR12 505 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms