RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 CAMKK1Q8N5S9 505 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 FEM1AQ9BSK4 669 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 MAGEB5Q9BZ81 275 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 INTS6Q9UL03 887 aaKnown RBP13.61□□□□□ -0.23
CKAP2-202ENST00000378034 NEU3Q9UQ49 428 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 HCN4Q9Y3Q4 1203 aa13.61□□□□□ -0.23
CKAP2-202ENST00000378034 CREB3O43889 395 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 SRPRAP08240 638 aaKnown RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 KRT7P08729 469 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 RARAP10276 462 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ETFBP38117 255 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 SSR1P43307 286 aaKnown RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 DGKEP52429 567 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 TPI1P60174 286 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 SATB1Q01826 763 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ANGPT1Q15389 498 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 DAB2IPQ5VWQ8 1189 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 POLNQ7Z5Q5 900 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 TFAP2DQ7Z6R9 452 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 KIAA1328Q86T90 577 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 RTL3Q8N8U3 475 aaKnown RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ACRBPQ8NEB7 543 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ALG14Q96F25 216 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 GABRG3Q99928 467 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 FAM126AQ9BYI3 521 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ZWILCHQ9H900 591 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 GPATCH2LQ9NWQ4 482 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 OR51B4Q9Y5P0 310 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 EEF2KO00418 725 aaKnown RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 MZF1P28698 734 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 VASPP50552 380 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 NRLP54845 237 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ZNF234Q14588 700 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 CA9Q16790 459 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 RNF219Q5W0B1 726 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 MAML2Q8IZL2 1156 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 APCDD1Q8J025 514 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 CCDC33Q8N5R6 958 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 KCTD15Q96SI1 283 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 MUC3BQ9H195 1237 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 RCOR3Q9P2K3 495 aaPredicted RBP13.6□□□□□ -0.23
CKAP2-202ENST00000378034 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
CKAP2-202ENST00000378034 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 CXorf51AA0A1B0GTR3 108 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 TMEM110-MUSTN1A8MSY1 372 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 H3BRJ5 948 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 SGK1O00141 431 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 ADAM23O75077 832 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 TCF4P15884 667 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 ARL4AP40617 200 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 ST8SIA6P61647 398 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 ECT2LQ008S8 904 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 KIF5AQ12840 1032 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 CRY1Q16526 586 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 PTPRNQ16849 979 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 PPP6R3Q5H9R7 873 aaPredicted RBP13.59□□□□□ -0.23
CKAP2-202ENST00000378034 KCNT1Q5JUK3 1230 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 LRRC38Q5VT99 294 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 FAM71BQ8TC56 605 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 HSPH1Q92598 858 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 C2orf49Q9BVC5 232 aaPredicted RBP13.59□□□□□ -0.23
CKAP2-202ENST00000378034 MAGEH1Q9H213 219 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 POLMQ9NP87 494 aaPredicted RBP13.59□□□□□ -0.23
CKAP2-202ENST00000378034 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
CKAP2-202ENST00000378034 VPS28Q9UK41 221 aa13.59□□□□□ -0.23
CKAP2-202ENST00000378034 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
CKAP2-202ENST00000378034 CCDC163A0A0D9SF12 145 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 RCCD1A6NED2 376 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 ANTXRLA6NF34 631 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 K7ESF4 209 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 DAPK3O43293 454 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 TDGF1P13385 188 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 PTPN5P54829 565 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 YBEYP58557 167 aaPredicted RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 GNA12Q03113 381 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 CSTF1Q05048 431 aaKnown RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 PDK2Q15119 407 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 SMTNL2Q2TAL5 461 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 FNDC3BQ53EP0 1204 aaKnown RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 OR52K2Q8NGK3 314 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 SORCS1Q8WY21 1168 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 ACOX2Q99424 681 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 ERVW-1Q9UQF0 538 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 MYO18AQ92614 2054 aaKnown RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 RAMP2O60895 175 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 ALDH1A2O94788 518 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 APBB3O95704 486 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 HOXB2P14652 356 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 GOT1P17174 413 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 NNMTP40261 264 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 IL12RB1P42701 662 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 TAS2R40P59535 323 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms