RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 KRT16P08779 473 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 PCNAP12004 261 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 SERPINB5P36952 375 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 NDST1P52848 882 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 POM121L1PQ3SYA9 428 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 FIGNQ5HY92 759 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 PLEKHA7Q6IQ23 1121 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 LRRC55Q6ZSA7 311 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 TRAPPC5Q8IUR0 188 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 MAB21L3Q8N8X9 362 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF510Q9Y2H8 683 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.64
HIF3A-205ENST00000377670 DYTNA2CJ06 578 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 CACNB4O00305 520 aaPredicted RBP11.02□□□□□ -0.64
HIF3A-205ENST00000377670 O00370 1275 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.64
HIF3A-205ENST00000377670 FKBP9O95302 570 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 TUBP50607 506 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 HSDL1Q3SXM5 330 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 ALKBH2Q6NS38 261 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 FKBP9P1Q75LS8 142 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 HSD17B14Q9BPX1 270 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.64
HIF3A-205ENST00000377670 PNMA8BQ9ULN7 279 aaPredicted RBP11.02□□□□□ -0.64
HIF3A-205ENST00000377670 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 TRIM25Q14258 630 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 MARC1Q5VT66 337 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 C4orf22Q6V702 233 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 FAM172AQ8WUF8 416 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 FOXP3Q9BZS1 431 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 TBC1D14Q9P2M4 693 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 RCCD1A6NED2 376 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 TBL3Q12788 808 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 USP4Q13107 963 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 OTOP3Q7RTS5 596 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 SCUBE3Q8IX30 993 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 GTPBP2Q9BX10 602 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 ZFP14Q9HCL3 533 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 CNGB3Q9NQW8 809 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 PIH1D1Q9NWS0 290 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 SIK3Q9Y2K2 1263 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 INSL6Q9Y581 213 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 CACNA1FO60840 1977 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 OR6C75A6NL08 312 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 CYP3A7P24462 503 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 RPL9P32969 192 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 JAG1P78504 1218 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 OTUD4Q01804 1114 aaKnown RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 DMPKQ09013 629 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 MAPK7Q13164 816 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 SLC9A5Q14940 896 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 KLHL35Q6PF15 583 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 PRUNE1Q86TP1 453 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 NAT16Q8N8M0 369 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 PLEKHA8Q96JA3 519 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 CNPY3Q9BT09 278 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 UBA2Q9UBT2 640 aaPredicted RBP11.02□□□□□ -0.65
HIF3A-205ENST00000377670 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.65
HIF3A-205ENST00000377670 FAM237AA0A1B0GTK4 181 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 LINC00854A0A1B0GVQ3 168 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 TRIM49D1C9J1S8 452 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 TBL1XO60907 577 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 MMP3P08254 477 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 SNHG28P0DPA3 235 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 CYP2C18P33260 490 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 RAET1GQ6H3X3 334 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 SETD3Q86TU7 594 aaPredicted RBP11.01□□□□□ -0.65
HIF3A-205ENST00000377670 TSTD1Q8NFU3 115 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 HPS4Q9NQG7 708 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 ABCC13Q9NSE7 274 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 NUDT5Q9UKK9 219 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
HIF3A-205ENST00000377670 SASH3O75995 380 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 CCNE2O96020 404 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 GLI1P08151 1106 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 GPR1P46091 355 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 PSEN1P49768 467 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 ATP1A4Q13733 1029 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 ARMC12Q5T9G4 340 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 NPAS4Q8IUM7 802 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 APOL2Q9BQE5 337 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 ZNF556Q9HAH1 456 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
HIF3A-205ENST00000377670 GUCA1CO95843 209 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 NUDT14O95848 222 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 PTPN2P17706 415 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 TIGD5Q53EQ6 642 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 MAP4K3Q8IVH8 894 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 RIN3Q8TB24 985 aa11.01□□□□□ -0.65
HIF3A-205ENST00000377670 LENG1Q96BZ8 264 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms