RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 GORASP1Q9BQQ3 440 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 RNF39Q9H2S5 420 aa25.88■■□□□ 1.73
C9orf40-201ENST00000376854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 FAM72CH0Y354 149 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 XPOTO43592 962 aaKnown RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 AP2A1O95782 977 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 F7P08709 466 aaPredicted RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 EPHB1P54762 984 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 FAM72AQ5TYM5 149 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 FAM72DQ6L9T8 149 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 FAM72BQ86X60 149 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 SIX6OS1Q8N1H7 587 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 DNAAF3Q8N9W5 541 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 GTF3C2Q8WUA4 911 aaPredicted RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 AZIN2Q96A70 460 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 AGAP2Q99490 1192 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 BFARQ9NZS9 450 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 PCDHB12Q9Y5F1 795 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 ERCC2P18074 760 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 ACAT1P24752 427 aaKnown RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 RNF220Q5VTB9 566 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 HFE2Q6ZVN8 426 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 ZNF467Q7Z7K2 595 aaPredicted RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 PYDC1Q8WXC3 89 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 SLC2A13Q96QE2 648 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 NR1H4Q96RI1 486 aaPredicted RBP25.87■■□□□ 1.73
C9orf40-201ENST00000376854 CDY2AQ9Y6F7 541 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 CDY1Q9Y6F8 540 aa25.87■■□□□ 1.73
C9orf40-201ENST00000376854 PDE5AO76074 875 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 WARSP23381 471 aaKnown RBP25.86■■□□□ 1.73
C9orf40-201ENST00000376854 USP4Q13107 963 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 PCBP1Q15365 356 aaKnown RBP eCLIP25.86■■□□□ 1.73
C9orf40-201ENST00000376854 TMEM135Q86UB9 458 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 SLC7A14Q8TBB6 771 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 ACTRT2Q8TDY3 377 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 TSC22D3Q99576 134 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 OXCT2Q9BYC2 517 aaPredicted RBP25.86■■□□□ 1.73
C9orf40-201ENST00000376854 COG4Q9H9E3 785 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 CYP4F11Q9HBI6 524 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 LOC100653049A0A140TA62 436 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 STRNO43815 780 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 KRT34O76011 436 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 HSPA4LO95757 839 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 KCNE1P15382 129 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 LILRA4P59901 499 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 CDC16Q13042 620 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 CFAP157Q5JU67 520 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 PGM2L1Q6PCE3 622 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 PDZD4Q76G19 769 aaPredicted RBP25.86■■□□□ 1.73
C9orf40-201ENST00000376854 ADGRG6Q86SQ4 1221 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 PHTF2Q8N3S3 785 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 RNF169Q8NCN4 708 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 NPLOC4Q8TAT6 608 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 KCTD13Q8WZ19 329 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 IFT43Q96FT9 208 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 SPON1Q9HCB6 807 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 CDH22Q9UJ99 828 aa25.86■■□□□ 1.73
C9orf40-201ENST00000376854 NRCAMQ92823 1304 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 A0A096LPK6 155 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ZCWPW2A0A1B0GU75 182 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 BUD23O43709 281 aaKnown RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CAPN15O75808 1086 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 UBTFL6P0CB48 400 aaPredicted RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ADRA1BP35368 520 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 PRAMEF19Q5SWL8 479 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 PAQR9Q6ZVX9 377 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 RAPH1Q70E73 1250 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ZNF781Q8N8C0 355 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ADAM32Q8TC27 787 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ZNF483Q8TF39 744 aaPredicted RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 TINF2Q9BSI4 451 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CDH19Q9H159 772 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CAB39LQ9H9S4 337 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 DCXO43602 365 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 SORBS2O94875 1100 aaKnown RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CYP2C9P11712 490 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 PTPN1P18031 435 aaKnown RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 TKTL1P51854 596 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 BTKQ06187 659 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 ANKRD20A4Q4UJ75 823 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 NAPRTQ6XQN6 538 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CLEC20AQ6ZU45 233 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 PAXIP1Q6ZW49 1069 aaPredicted RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 LENG1Q96BZ8 264 aaPredicted RBP25.85■■□□□ 1.73
C9orf40-201ENST00000376854 CASS4Q9NQ75 786 aa25.85■■□□□ 1.73
C9orf40-201ENST00000376854 G3V2L1 256 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 MPOP05164 745 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 SMIM10L2AP0DMW4 78 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 SMIM10L2BP0DMW5 78 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 ABCG1P45844 678 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 IRF9Q00978 393 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 CCNIQ14094 377 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 GRB14Q14449 540 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 DLG2Q15700 870 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 HSP90AA5PQ58FG0 334 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 XKR4Q5GH76 650 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 DHDDSQ86SQ9 333 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 DEFB107AQ8IZN7 70 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 TOP6BLQ8N6T0 577 aa25.84■■□□□ 1.73
C9orf40-201ENST00000376854 PHC3Q8NDX5 983 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms