RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 VANGL2Q9ULK5 521 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 RRN3P2A6NIE6 340 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 DCLK1O15075 740 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 AP2A1O95782 977 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 SNAI1O95863 264 aaPredicted RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 MMP3P08254 477 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 F7P08709 466 aaPredicted RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 PTPN3P26045 913 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 MAGEA12P43365 314 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 LIMK2P53671 638 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 CDC42EP1Q00587 391 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 DGKDQ16760 1214 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 FSCBQ5H9T9 825 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PDZD4Q76G19 769 aaPredicted RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 DHDDSQ86SQ9 333 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 TMEM135Q86UB9 458 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 ZNF781Q8N8C0 355 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PPP1R13LQ8WUF5 828 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 ISL2Q96A47 359 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 CDH19Q9H159 772 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 PAPOLBQ9NRJ5 636 aaKnown RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 PIGVQ9NUD9 493 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 MAGED2Q9UNF1 606 aaPredicted RBP14.88□□□□□ -0.03
MSH5-201ENST00000375703 OTOFQ9HC10 1997 aa14.88□□□□□ -0.03
MSH5-201ENST00000375703 A0A096LPK6 155 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 FAM72CH0Y354 149 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 XPOTO43592 962 aaKnown RBP14.87□□□□□ -0.03
MSH5-201ENST00000375703 MPOP05164 745 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 GNAT1P11488 350 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 SMPD1P17405 629 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ERCC2P18074 760 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ITGAXP20702 1163 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 CUL3Q13618 768 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 CCNIQ14094 377 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 LRRC36Q1X8D7 754 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 SV2CQ496J9 727 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ANKRD20A4Q4UJ75 823 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 HSP90AA5PQ58FG0 334 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 FAM72AQ5TYM5 149 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 FAM72DQ6L9T8 149 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 SLC30A9Q6PML9 568 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 EPGNQ6UW88 154 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 FRMD7Q6ZUT3 714 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 BNIPLQ7Z465 357 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 OSTM1Q86WC4 334 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 FAM72BQ86X60 149 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 SREK1Q8WXA9 508 aaKnown RBP14.87□□□□□ -0.03
MSH5-201ENST00000375703 CCDC124Q96CT7 223 aaKnown RBP14.87□□□□□ -0.03
MSH5-201ENST00000375703 OXCT2Q9BYC2 517 aaPredicted RBP14.87□□□□□ -0.03
MSH5-201ENST00000375703 KATNBL1Q9H079 304 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 CAB39LQ9H9S4 337 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 EME2A4GXA9 379 aaPredicted RBP14.87□□□□□ -0.03
MSH5-201ENST00000375703 G3V2L1 256 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ZMPSTE24O75844 475 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 COX4I1P13073 169 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 NPR3P17342 541 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ADRA1BP35368 520 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 CCNA1P78396 465 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 BTKQ06187 659 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 PEX6Q13608 980 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 NAPRTQ6XQN6 538 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 SIX6OS1Q8N1H7 587 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 HIPK4Q8NE63 616 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 NLGN2Q8NFZ4 835 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 OR6J1Q8NGC5 347 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 URGCPQ8TCY9 931 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ARHGAP26Q9UNA1 814 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 POMPQ9Y244 141 aa14.87□□□□□ -0.03
MSH5-201ENST00000375703 ZCWPW2A0A1B0GU75 182 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 E9PBE3 544 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 ATP9BO43861 1147 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 KLHL41O60662 606 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TRIM13O60858 407 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 DARSP14868 501 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 PTPN1P18031 435 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 ACAT1P24752 427 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 ABCG1P45844 678 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 PAPOLAP51003 745 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 LILRA4P59901 499 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 SOX4Q06945 474 aaPredicted RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 DLG2Q15700 870 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 SLC9B1Q4ZJI4 515 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 RNF111Q6ZNA4 994 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 LIMS2Q7Z4I7 341 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 HPS6Q86YV9 775 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 FBXW8Q8N3Y1 598 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 SLC7A14Q8TBB6 771 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 JADE3Q92613 823 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 MFSD3Q96ES6 412 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 GBP5Q96PP8 586 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TRAPPC9Q96Q05 1148 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 GORASP1Q9BQQ3 440 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 C2P06681 752 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 IRF9Q00978 393 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms