RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GIPC1O14908 333 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 AQP9O43315 295 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CAPN15O75808 1086 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CXCL8P10145 99 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CCT8P50990 548 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 DMPKQ09013 629 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TRIM16LQ309B1 348 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ZBED5Q49AG3 693 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TEX44Q53QW1 395 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ATF7IP2Q5U623 682 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 IL23RQ5VWK5 629 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 KRT39Q6A163 491 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 IQSEC1Q6DN90 963 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CHERPQ8IWX8 916 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ABRAQ8N0Z2 381 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CD99L2Q8TCZ2 262 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MRPL4Q9BYD3 311 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 AVENQ9NQS1 362 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MAN1C1Q9NR34 630 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PNPLA3Q9NST1 481 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 NXF1Q9UBU9 619 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 DRG1Q9Y295 367 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CARD8Q9Y2G2 431 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PLLPQ9Y342 182 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 UNCXA6NJT0 531 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CA12O43570 354 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MSCO60682 206 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SULT1C4O75897 302 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PROSCO94903 275 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CYP11B1P15538 503 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 NDST2P52849 883 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MRPS22P82650 360 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 NR1D2Q14995 579 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MOGQ16653 247 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 GLRA4Q5JXX5 417 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 KAZNQ674X7 775 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SH2D5Q6ZV89 423 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TBC1D15Q8TC07 691 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SHCBP1LQ9BZQ2 653 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF395Q9H8N7 513 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 RAB20Q9NX57 234 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 STK39Q9UEW8 545 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 GJD2Q9UKL4 321 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CFAP99D6REC4 459 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SGK1O00141 431 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 KPNA4O00629 521 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 EXTL3O43909 919 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF865P0CJ78 1059 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PTPN2P17706 415 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 MFAP3P55082 362 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 PSMC1P62191 440 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TXNL4AP83876 142 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 NFX1Q12986 1120 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 BBS9Q3SYG4 887 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 ZNF512Q96ME7 567 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 FAM96AQ9H5X1 160 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 C10orf88Q9H8K7 445 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 XAB2Q9HCS7 855 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 THAP1Q9NVV9 213 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 CNOT11Q9UKZ1 510 aaKnown RBP12.42□□□□□ -0.42
C9orf3-203ENST00000375315 AP4S1Q9Y587 144 aa12.42□□□□□ -0.42
C9orf3-203ENST00000375315 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 MGEA5O60502 916 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 CST3P01034 146 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 MYL4P12829 197 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 KPNA1P52294 538 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 FLOT2Q14254 428 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 PHKG1Q16816 387 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 PDIK1LQ8N165 341 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 PCYOX1LQ8NBM8 494 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 TRPV1Q8NER1 839 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 KAT6AQ92794 2004 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 TOMM70O94826 608 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 HLA-DRAP01903 254 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 JAK1P23458 1154 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 FCGRTP55899 365 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 MYBPC2Q14324 1141 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 TTC39BQ5VTQ0 682 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 TDRD10Q5VZ19 366 aaKnown RBP12.41□□□□□ -0.42
C9orf3-203ENST00000375315 XKR5Q6UX68 686 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 CDHR3Q6ZTQ4 885 aa12.41□□□□□ -0.42
C9orf3-203ENST00000375315 CATSPER4Q7RTX7 472 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms