RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ZFATQ9P243 1243 aa18.72■□□□□ 0.59
RXRB-202ENST00000374685 A8MUI8 341 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 CCND1P24385 295 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 NEK3P51956 506 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 TMPRSS15P98073 1019 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 PPM1JQ5JR12 505 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 CLLU1OSQ5K130 101 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 CCSAPQ6IQ19 270 aaPredicted RBP18.71■□□□□ 0.59
RXRB-202ENST00000374685 C4orf22Q6V702 233 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 SMC1BQ8NDV3 1235 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ARNTL2Q8WYA1 636 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 LRRC39Q96DD0 335 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 FAM193BQ96PV7 902 aaPredicted RBP18.71■□□□□ 0.59
RXRB-202ENST00000374685 NMUR1Q9HB89 426 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ARHGAP42A6NI28 874 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 TRDMT1O14717 391 aaKnown RBP18.71■□□□□ 0.59
RXRB-202ENST00000374685 HMBSP08397 361 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 LRRC8BQ6P9F7 803 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 NLRP9Q7RTR0 991 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ZNF276Q8N554 614 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ATAD1Q8NBU5 361 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 MFSD3Q96ES6 412 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 PLCD4Q9BRC7 762 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 ATXN3LQ9H3M9 355 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 PNPLA8Q9NP80 782 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 USH1CQ9Y6N9 552 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 BPTFQ12830 3046 aa18.71■□□□□ 0.59
RXRB-202ENST00000374685 A0A1W2PQH9 124 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 FAM159BA6NKW6 160 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 TROVE2P10155 538 aaKnown RBP eCLIP18.7■□□□□ 0.58
RXRB-202ENST00000374685 CXCR3P49682 368 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CCNG1P51959 295 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CHI3L2Q15782 390 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CSNK1G1Q9HCP0 422 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 TDRD15B5MCY1 1934 aaKnown RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 PAGE1O75459 146 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 TADA2AO75478 443 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 MT-CYBP00156 380 aaPredicted RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 F9P00740 461 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CDC25CP30307 473 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 ALDH3A1P30838 453 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CD68P34810 354 aaPredicted RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 GARSP41250 739 aaKnown RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 SLC18A1P54219 525 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 ZBTB16Q05516 673 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 BNIP1Q12981 228 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 SEMA3BQ13214 749 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 SH2D5Q6ZV89 423 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 TFAP2DQ7Z6R9 452 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 CMC1Q7Z7K0 106 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 NTAN1Q96AB6 310 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 FCRL3Q96P31 734 aaPredicted RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 FBXO6Q9NRD1 293 aaPredicted RBP18.7■□□□□ 0.58
RXRB-202ENST00000374685 PCDH10Q9P2E7 1040 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 VANGL2Q9ULK5 521 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 SLC27A5Q9Y2P5 690 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 NUMBLQ9Y6R0 609 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 PDE4DIPQ5VU43 2346 aa18.7■□□□□ 0.58
RXRB-202ENST00000374685 TPP1O14773 563 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 TBX18O95935 607 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 ETV4P43268 484 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 SLC18A2Q05940 514 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 RNF43Q68DV7 783 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 DCLRE1AQ6PJP8 1040 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 MIB1Q86YT6 1006 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 PPP1R14CQ8TAE6 165 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 ZFAND2BQ8WV99 257 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 C10orf82Q8WW14 230 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 CDKL2Q92772 493 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 ANKRD27Q96NW4 1050 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 SLC9A7Q96T83 725 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 VPS11Q9H270 941 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 PAPOLBQ9NRJ5 636 aaKnown RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 ABL2P42684 1182 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 LINC01599Q8WXQ3 324 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 SUSD3Q96L08 255 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 FCRL2Q96LA5 508 aaPredicted RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 GORASP1Q9BQQ3 440 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 SSU72Q9NP77 194 aaKnown RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 CHRAC1Q9NRG0 131 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 FAM237BA0A1B0GVD1 139 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 M0QZQ0 153 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 KRT16P08779 473 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 TRIM71Q2Q1W2 868 aaKnown RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 HSP90AA5PQ58FG0 334 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 NOMO2Q5JPE7 1267 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 NUDCD3Q8IVD9 361 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 PRR11Q96HE9 360 aaPredicted RBP18.69■□□□□ 0.58
RXRB-202ENST00000374685 TBC1D13Q9NVG8 400 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 ZNF358Q9NW07 568 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 OSER1Q9NX31 292 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 MOCS1Q9NZB8 636 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 PLLPQ9Y342 182 aa18.69■□□□□ 0.58
RXRB-202ENST00000374685 C9IYK1 514 aa18.68■□□□□ 0.58
RXRB-202ENST00000374685 POLBP06746 335 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms