RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MAGEA12P43365 314 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PTDSS1P48651 473 aaKnown RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 LHX1P48742 406 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SERPINB8P50452 374 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SOX4Q06945 474 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PDE1CQ14123 709 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 ZNF618Q5T7W0 954 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 GPR153Q6NV75 609 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 TAF2Q6P1X5 1199 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 RFWD3Q6PCD5 774 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 CXCL17Q6UXB2 119 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 CLEC20AQ6ZU45 233 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PID1Q7Z2X4 250 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 NET1Q7Z628 596 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 TTC7BQ86TV6 843 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PIWIL2Q8TC59 973 aaKnown RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 CERS2Q96G23 380 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 PRR11Q96HE9 360 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 RILPQ96NA2 401 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 MAGEB5Q9BZ81 275 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 DNAJC28Q9NX36 388 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SYBUQ9NX95 663 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 BFARQ9NZS9 450 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SEPT10Q9P0V9 454 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 KLHL8Q9P2G9 620 aaPredicted RBP14.27□□□□□ -0.12
HMGCL-203ENST00000374490 ZNF212Q9UDV6 495 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 ANGPTL2Q9UKU9 493 aa14.27□□□□□ -0.12
HMGCL-203ENST00000374490 SCN10AQ9Y5Y9 1956 aa14.27□□□□□ -0.13
HMGCL-203ENST00000374490 M0QZ92 97 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CAPN9O14815 690 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PROCP04070 461 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 MPOP05164 745 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 ENO1P06733 434 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 FGF3P11487 239 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 HOXC8P31273 242 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SERPINB6P35237 376 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 HADHAP40939 763 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SLC1A6P48664 564 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 NPY2RP49146 381 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TKTL1P51854 596 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 DAOAP59103 153 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TPI1P60174 286 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SLC34A1Q06495 639 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PPIDQ08752 370 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 BLMHQ13867 455 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 HIC1Q14526 733 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 KPNB1Q14974 876 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TRMT5Q32P41 509 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 KHDC1Q4VXA5 237 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TEDDM1Q5T9Z0 273 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 DSTYKQ6XUX3 929 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 APLFQ8IW19 511 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CCDC33Q8N5R6 958 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SMG8Q8ND04 991 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PPFIBP2Q8ND30 876 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TMEM40Q8WWA1 233 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 DNAJC9Q8WXX5 260 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TRIM56Q9BRZ2 755 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CCDC106Q9BWC9 280 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CASS4Q9NQ75 786 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 NSMCE4AQ9NXX6 385 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 STX18Q9P2W9 335 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 EMCNQ9ULC0 261 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RANBP2P49792 3224 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 C2orf71A6NGG8 1288 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 H0Y3Z8 333 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 NVLO15381 856 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TM7SF2O76062 418 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 USP1O94782 785 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 ALOX15P16050 662 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 ERCC2P18074 760 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PTPN3P26045 913 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CSE1LP55060 971 aaKnown RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 NKX3-2P78367 333 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 COG7P83436 770 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 NME3Q13232 169 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RCN1Q15293 331 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 LRIT3Q3SXY7 679 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 HSF5Q4G112 596 aaPredicted RBP14.26□□□□□ -0.13
HMGCL-203ENST00000374490 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 CES4AQ5XG92 561 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 PAQR9Q6ZVX9 377 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 HDAC11Q96DB2 347 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 RBBP8Q99708 897 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 TRIM62Q9BVG3 475 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 ULBP1Q9BZM6 244 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 GBA3Q9H227 469 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 GOLGA2P5Q9HBQ8 144 aa14.26□□□□□ -0.13
HMGCL-203ENST00000374490 KRT82Q9NSB4 513 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms