RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SCOCQ9UIL1 159 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 PCDHA11Q9Y5I1 949 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 SOCS7O14512 581 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 NRP1O14786 923 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 DAB1O75553 588 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 LMNAP02545 664 aaKnown RBP13.84□□□□□ -0.19
CLIC4-201ENST00000374379 TSPAN8P19075 237 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 GRK4P32298 578 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CDK16Q00536 496 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 USP4Q13107 963 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 VEPH1Q14D04 833 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CNGA3Q16281 694 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 ATP6V0D2Q8N8Y2 350 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 MARK4Q96L34 752 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CNGB3Q9NQW8 809 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 HACD3Q9P035 362 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 DERAQ9Y315 318 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 NCAM2O15394 837 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 BEST1O76090 585 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 XPAP23025 273 aaPredicted RBP13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CCL23P55773 120 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CRHR2Q13324 411 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 UBAP2LQ14157 1087 aaKnown RBP13.84□□□□□ -0.19
CLIC4-201ENST00000374379 TCEAL1Q15170 157 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 PACS1Q6VY07 963 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 CLEC20AQ6ZU45 233 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 SLC4A5Q9BY07 1137 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 GPAMQ9HCL2 828 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 DSEQ9UL01 958 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 RREB1Q92766 1687 aa13.84□□□□□ -0.19
CLIC4-201ENST00000374379 DNAJC25-GNG10A0A024R161 153 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 S100BP04271 92 aaPredicted RBP13.83□□□□□ -0.19
CLIC4-201ENST00000374379 CALB2P22676 271 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 POLE2P56282 527 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 PLIN5Q00G26 463 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 TRIP10Q15642 601 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 SPRED3Q2MJR0 410 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 TTC7BQ86TV6 843 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 SH3TC2Q8TF17 1288 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 THAP1Q9NVV9 213 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 ZNF358Q9NW07 568 aa13.83□□□□□ -0.19
CLIC4-201ENST00000374379 NVLO15381 856 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 CYP3A5P20815 502 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 HOXA11P31270 313 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 DLG2Q15700 870 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 FAM187BQ17R55 369 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ZRANB3Q5FWF4 1079 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ISLR2Q6UXK2 745 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PIGWQ7Z7B1 504 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 EGFL8Q99944 293 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 FAM96AQ9H5X1 160 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 SLC24A3Q9HC58 644 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PCDHB5Q9Y5E4 795 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 EVPLQ92817 2033 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 KPNA6O60684 536 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 KLHL2O95198 593 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PTPN9P43378 593 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ARHGEF6Q15052 776 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 TCHHL1Q5QJ38 904 aaPredicted RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ZNF280DQ6N043 979 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 SLC41A1Q8IVJ1 513 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 C10orf107Q8IVU9 208 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ARFGAP1Q8N6T3 406 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PQLC3Q8N755 202 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 TDRD5Q8NAT2 981 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 DNAJC9Q8WXX5 260 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.83□□□□□ -0.27e-6■■■■■ 27.5
CLIC4-201ENST00000374379 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 NMUR2Q9GZQ4 415 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 NMRAL1Q9HBL8 299 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PSMD3O43242 534 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 RAMP2O60895 175 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 PAGE1O75459 146 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 CHRM3P20309 590 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 YWHAQP27348 245 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 GRB14Q14449 540 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 CFAP52Q8N1V2 620 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
CLIC4-201ENST00000374379 SPDL1Q96EA4 605 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 CATSPER2Q96P56 530 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 ARL8BQ9NVJ2 186 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 GGA2Q9UJY4 613 aa13.83□□□□□ -0.2
CLIC4-201ENST00000374379 F5H5T6 163 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 F2P00734 622 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 SERPINE1P05121 402 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 ZBTB48P10074 688 aaPredicted RBP13.82□□□□□ -0.2
CLIC4-201ENST00000374379 PTPN7P35236 360 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 CD86P42081 329 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 SLC25A3Q00325 362 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 ITGA7Q13683 1181 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 PSMD5Q16401 504 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 FAM83EQ2M2I3 478 aa13.82□□□□□ -0.2
CLIC4-201ENST00000374379 RNF43Q68DV7 783 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms