RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 SELENOSQ9BQE4 189 aa21.1■□□□□ 0.97
SYNC-201ENST00000373484 HPS4Q9NQG7 708 aa21.1■□□□□ 0.97
SYNC-201ENST00000373484 TAS2R14Q9NYV8 317 aa21.1■□□□□ 0.97
SYNC-201ENST00000373484 FBXL21Q9UKT6 434 aa21.1■□□□□ 0.97
SYNC-201ENST00000373484 HBS1LQ9Y450 684 aaKnown RBP21.1■□□□□ 0.97
SYNC-201ENST00000373484 SLC9A3R1O14745 358 aaPredicted RBP21.09■□□□□ 0.97
SYNC-201ENST00000373484 DAB1O75553 588 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 TCEA3O75764 348 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 CALB1P05937 261 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 MAN1A1P33908 653 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 C1QBPQ07021 282 aaKnown RBP21.09■□□□□ 0.97
SYNC-201ENST00000373484 TNK2Q07912 1038 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 IER5LQ5T953 404 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 LRRC34Q8IZ02 419 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 DEFB106AQ8N104 65 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 CSGALNACT1Q8TDX6 532 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 PLD4Q96BZ4 506 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 LINC00597Q9H2U6 94 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 EBF3Q9H4W6 596 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 GTSE1Q9NYZ3 720 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 WDR35Q9P2L0 1181 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 TBC1D14Q9P2M4 693 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 LSM7Q9UK45 103 aaKnown RBP21.09■□□□□ 0.97
SYNC-201ENST00000373484 MIA3Q5JRA6 1907 aa21.09■□□□□ 0.97
SYNC-201ENST00000373484 SCAMP3O14828 347 aaKnown RBP21.08■□□□□ 0.97
SYNC-201ENST00000373484 MSI1O43347 362 aaKnown RBP21.08■□□□□ 0.97
SYNC-201ENST00000373484 HMBSP08397 361 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 COILP38432 576 aaPredicted RBP21.08■□□□□ 0.97
SYNC-201ENST00000373484 AUHQ13825 339 aaKnown RBP21.08■□□□□ 0.97
SYNC-201ENST00000373484 CRYMQ14894 314 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 DCAF6Q58WW2 860 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 TLDC1Q6P9B6 456 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 CCDC137Q6PK04 289 aaKnown RBP21.08■□□□□ 0.97
SYNC-201ENST00000373484 MAIP1Q8WWC4 291 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 SEMA4AQ9H3S1 761 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 LRRC19Q9H756 370 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 HEBP1Q9NRV9 189 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 CTTNBP2NLQ9P2B4 639 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 CA14Q9ULX7 337 aa21.08■□□□□ 0.97
SYNC-201ENST00000373484 KRBA1A5PL33 1030 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 GOLGA8SH3BPF8 625 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 SNX3O60493 162 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 IGLV3-25P01717 112 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 FTLP02792 175 aaPredicted RBP21.08■□□□□ 0.96
SYNC-201ENST00000373484 ARSAP15289 507 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 CAV1Q03135 178 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 RUNX3Q13761 415 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 TRIP4Q15650 581 aaPredicted RBP21.08■□□□□ 0.96
SYNC-201ENST00000373484 SLC44A4Q53GD3 710 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 Q6ZNB5 142 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 TAC4Q86UU9 113 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 BBS7Q8IWZ6 715 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 MCOLN2Q8IZK6 566 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 ATP2A3Q93084 1043 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 OTUB2Q96DC9 234 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 SERPINB11Q96P15 392 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 EBF2Q9HAK2 575 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 NOD2Q9HC29 1040 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 ARHGEF3Q9NR81 526 aa21.08■□□□□ 0.96
SYNC-201ENST00000373484 IGLV3-27P01718 113 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 NOS2P35228 1153 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 KPNA1P52294 538 aaPredicted RBP21.07■□□□□ 0.96
SYNC-201ENST00000373484 MLF2Q15773 248 aaPredicted RBP21.07■□□□□ 0.96
SYNC-201ENST00000373484 ITPRIPL2Q3MIP1 535 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 GALNTL6Q49A17 601 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 ARCQ7LC44 396 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 SLC13A5Q86YT5 568 aaPredicted RBP21.07■□□□□ 0.96
SYNC-201ENST00000373484 VCPIP1Q96JH7 1222 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 DCLK3Q9C098 648 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 UVRAGQ9P2Y5 699 aa21.07■□□□□ 0.96
SYNC-201ENST00000373484 OTOL1A6NHN0 477 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 SUN1O94901 812 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 TRUB2O95900 331 aaKnown RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 KLKB1P03952 638 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 CYP1A2P05177 515 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 MATKP42679 507 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 MLLT6P55198 1093 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 PITX1P78337 314 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 IFI35P80217 286 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 PPP1R7Q15435 360 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 HIBCHQ6NVY1 386 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 ADGRG2Q8IZP9 1017 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 SIX5Q8N196 739 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 ADAM32Q8TC27 787 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 LRRC4CQ9HCJ2 640 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 BATF3Q9NR55 127 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 METTL5Q9NRN9 209 aaKnown RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.06■□□□□ 0.96
SYNC-201ENST00000373484 TLR6Q9Y2C9 796 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 TMEM221A6NGB7 291 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 M0R296 226 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 IRAK2O43187 625 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 NFATC1O95644 943 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 CORO1AP31146 461 aaKnown RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 PRKCQQ04759 706 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 RING1Q06587 406 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 CALCOCO2Q13137 446 aa21.06■□□□□ 0.96
SYNC-201ENST00000373484 ZNF211Q13398 564 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 EIF4EBP2Q13542 120 aaPredicted RBP21.06■□□□□ 0.96
SYNC-201ENST00000373484 PHLDB2Q86SQ0 1253 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms