RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 ST8SIA6P61647 398 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 SEMG2Q02383 582 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 PRAMEF14Q5SWL7 426 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 FKBP15Q5T1M5 1219 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 CAVIN1Q6NZI2 390 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 CLEC4CQ8WTT0 213 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 TRIM62Q9BVG3 475 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 IRX2Q9BZI1 471 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 NAT10Q9H0A0 1025 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 VPS16Q9H269 839 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 FHOD1Q9Y613 1164 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 KALRNO60229 2985 aa19.85■□□□□ 0.77
TRAPPC3-204ENST00000373166 KNL1Q8NG31 2342 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 LRRC72A6NJI9 287 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 ATXN7O15265 892 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 YKT6O15498 198 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 CD70P32970 193 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 RPL34P49207 117 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 KCNMA1Q12791 1236 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 KLHDC7AQ5VTJ3 777 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 MSANTD2Q6P1R3 559 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 COL26A1Q96A83 441 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 PRORYQ9H606 182 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 AASDHPPTQ9NRN7 309 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 ASXL3Q9C0F0 2248 aa19.84■□□□□ 0.77
TRAPPC3-204ENST00000373166 GOLGA4Q13439 2230 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 CABIN1Q9Y6J0 2220 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 FLNBO75369 2602 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 FOXN3O00409 490 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 IRAK2O43187 625 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 TBL1XO60907 577 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 PNMA6AP0CW24 399 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 CD38P28907 300 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 SLC11A2P49281 568 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 SGSHP51688 502 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 BPIFB4P59827 614 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 TARDBPQ13148 414 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 DNAJC3Q13217 504 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 PDCLQ13371 301 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 DRAP1Q14919 205 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 CST6Q15828 149 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 PIK3R6Q5UE93 754 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 NCEH1Q6PIU2 408 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 EID2Q8N6I1 236 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 LSM14AQ8ND56 463 aaKnown RBP19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 SAP25Q8TEE9 199 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 BAP1Q92560 729 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 FAM149B1Q96BN6 582 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 NOX5Q96PH1 765 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 SLC4A5Q9BY07 1137 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 NRSN2Q9GZP1 204 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 MTG2Q9H4K7 406 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 GDF3Q9NR23 364 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 PCDHGC3Q9UN70 934 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 CEP83Q9Y592 693 aa19.83■□□□□ 0.77
TRAPPC3-204ENST00000373166 E5RJQ4 531 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 CBX4O00257 560 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 MSI1O43347 362 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 ASLP04424 464 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 UCHL3P15374 230 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 KRT9P35527 623 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 ARRB1P49407 418 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 CLDN6P56747 220 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 RTP5Q14D33 572 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 SHBQ15464 509 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 HNRNPA1L2Q32P51 320 aaKnown RBP19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 DPY19L2P1Q6NXN4 242 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 RFWD3Q6PCD5 774 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 SLC47A2Q86VL8 602 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 PASD1Q8IV76 773 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 MFN1Q8IWA4 741 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 UNC45BQ8IWX7 931 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 FAM71AQ8IYT1 594 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 AOPEPQ8N6M6 819 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 OR2T34Q8NGX1 318 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 WFDC5Q8TCV5 224 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 TTC17Q96AE7 1141 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 OMDQ99983 421 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 NEUROG2Q9H2A3 272 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 PLCB1Q9NQ66 1216 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 SERGEFQ9UGK8 458 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 CYTH4Q9UIA0 394 aa19.82■□□□□ 0.76
TRAPPC3-204ENST00000373166 NUMA1Q14980 2115 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 A0A1W2PP55 124 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 MID1O15344 667 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 TLX3O43711 291 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 SIN3BO75182 1162 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 RNASEH2AO75792 299 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 WNT1P04628 370 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 CDK11BP21127 795 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 CLCN1P35523 988 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 ACADVLP49748 655 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 COPB1P53618 953 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 ANO6Q4KMQ2 910 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 HES3Q5TGS1 186 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 NUGGCQ68CJ6 796 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 TMEM110Q86TL2 294 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 DHX40Q8IX18 779 aaKnown RBP19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 FIBINQ8TAL6 211 aa19.81■□□□□ 0.76
TRAPPC3-204ENST00000373166 MYO19Q96H55 970 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms