RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ZCCHC18P0CG32 403 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ATP5C1P36542 298 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 TMEM26Q6ZUK4 368 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 COMMD2Q86X83 199 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 UXS1Q8NBZ7 420 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 NOA1Q8NC60 698 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 UBASH3BQ8TF42 649 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 VAT1Q99536 393 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PACSIN1Q9BY11 444 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 OXCT2Q9BYC2 517 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ZC3H13Q5T200 1668 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 CCDC162PA2VCL2 907 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 MAGEA10P43363 369 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 MMP13P45452 471 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 MOSPD2Q8NHP6 518 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 REXO4Q9GZR2 422 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 CDC42EP4Q9H3Q1 356 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PRKAG3Q9UGI9 489 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 NRCAMQ92823 1304 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 CYP1A1P04798 512 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ZNF24P17028 368 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 BDNFP23560 247 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 MACC1Q6ZN28 852 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ZNF571Q7Z3V5 609 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 TRPC4APQ8TEL6 797 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 GLMNQ92990 594 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PHF21BQ96EK2 531 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ASB2Q96Q27 587 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 POLR1EQ9GZS1 481 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ZDHHC6Q9H6R6 413 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 LRRC4BQ9NT99 713 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PIK3C2BO00750 1634 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 A0A087X1B8 175 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 RGS14O43566 566 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 SEC22BO75396 215 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 USP17L7P0C7H9 530 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 GP5P40197 560 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 BRSK2Q8IWQ3 736 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 TMEM132CQ8N3T6 1108 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PDCD10Q9BUL8 212 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 A1CFQ9NQ94 594 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 AVENQ9NQS1 362 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 EURLQ9NYK6 297 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 PTPRMP28827 1452 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 FAM205AQ6ZU69 1335 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 CCDC130P13994 396 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 HOXB8P17481 243 aaPredicted RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 IRAK1P51617 712 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 NAB1Q13506 487 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 SEC23AQ15436 765 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 FKBP1CQ5VVH2 108 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 SCARA3Q6AZY7 606 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 KRT77Q7Z794 578 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 TMEM237Q96Q45 408 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 TRIT1Q9H3H1 467 aaKnown RBP10.07□□□□□ -0.8
TRERF1-204ENST00000372922 SHOC2Q9UQ13 582 aa10.07□□□□□ -0.8
TRERF1-204ENST00000372922 FGF10O15520 208 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 KLHL41O60662 606 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 PAX3P23760 479 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 SLC1A6P48664 564 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 GCNT1Q02742 428 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 KPNB1Q14974 876 aaKnown RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 RCN1Q15293 331 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 CASP12Q6UXS9 341 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 OTOP1Q7RTM1 612 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 SCUBE3Q8IX30 993 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 DEFB106AQ8N104 65 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 WDR36Q8NI36 951 aaKnown RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 MCCC1Q96RQ3 725 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 FTHL17Q9BXU8 183 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 TKTL2Q9H0I9 626 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 MARCH2Q9P0N8 246 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 ZNF112Q9UJU3 913 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 DNMT3LQ9UJW3 386 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 CCDC154A6NI56 674 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 TPH1P17752 444 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 SNRPD1P62314 119 aaKnown RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 ARF5P84085 180 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 DDR2Q16832 855 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 ARMCX4Q5H9R4 360 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 TSHZ1Q6ZSZ6 1077 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 FAM228AQ86W67 206 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 EPHX4Q8IUS5 362 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 SUN5Q8TC36 379 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 HNRNPLLQ8WVV9 542 aaKnown RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 C2orf49Q9BVC5 232 aaPredicted RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 TMEM120AQ9BXJ8 343 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 RERGLQ9H628 205 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 RABL2BQ9UNT1 228 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 FAM50BQ9Y247 325 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 PPRC1Q5VV67 1664 aaKnown RBP10.06□□□□□ -0.8
TRERF1-204ENST00000372922 LRRC14BA6NHZ5 514 aa10.06□□□□□ -0.8
TRERF1-204ENST00000372922 RGS20O76081 388 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms