RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 SERPINC1P01008 464 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 ACADMP11310 421 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 SDC4P31431 198 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 HOXD12P35452 270 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 PTPN9P43378 593 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 STK19P49842 368 aaPredicted RBP23.34■■□□□ 1.33
COL9A2-201ENST00000372736 CDH4P55283 916 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 OXCT1P55809 520 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 C1QBPQ07021 282 aaKnown RBP23.34■■□□□ 1.33
COL9A2-201ENST00000372736 NUMA1Q14980 2115 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 C15orf59Q2T9L4 293 aaPredicted RBP23.34■■□□□ 1.33
COL9A2-201ENST00000372736 ALFQ53S48 1182 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 SH3PXD2AQ5TCZ1 1133 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 E4F1Q66K89 784 aaPredicted RBP23.34■■□□□ 1.33
COL9A2-201ENST00000372736 DGLUCYQ7Z3D6 616 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 C3orf20Q8ND61 904 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 C1orf74Q96LT6 269 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 EVLQ9UI08 416 aaPredicted RBP23.34■■□□□ 1.33
COL9A2-201ENST00000372736 TBC1D30Q9Y2I9 924 aa23.34■■□□□ 1.33
COL9A2-201ENST00000372736 IGLV3-10A0A075B6K4 115 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 TTC34A8MYJ7 566 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 KHNYNO15037 678 aaKnown RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 SIN3BO75182 1162 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 DPP6P42658 865 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 RPS14P62263 151 aaKnown RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 ZNF177Q13360 481 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 CDO1Q16878 200 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 ACBD5Q5T8D3 534 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 ZNF419Q96HQ0 510 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 RPL10LQ96L21 214 aaKnown RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 HAPLN3Q96S86 360 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 FEM1AQ9BSK4 669 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 EDEM2Q9BV94 578 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 RSPH9Q9H1X1 276 aaPredicted RBP23.33■■□□□ 1.33
COL9A2-201ENST00000372736 SLCO3A1Q9UIG8 710 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 OR51B4Q9Y5P0 310 aa23.33■■□□□ 1.33
COL9A2-201ENST00000372736 DRGXA6NNA5 263 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 KRT3P12035 628 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 OXTRP30559 389 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 RFC1P35251 1148 aaPredicted RBP23.32■■□□□ 1.32
COL9A2-201ENST00000372736 TPM4P67936 248 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 FANCCQ00597 558 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 SULT2A1Q06520 285 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 TRIM61Q5EBN2 209 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 C9orf64Q5T6V5 341 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 STPG1Q5TH74 334 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 RNF219Q5W0B1 726 aaPredicted RBP23.32■■□□□ 1.32
COL9A2-201ENST00000372736 CENPIQ92674 756 aaPredicted RBP23.32■■□□□ 1.32
COL9A2-201ENST00000372736 SELENOOQ9BVL4 669 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 GPR174Q9BXC1 333 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 TAS2R14Q9NYV8 317 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 PCDH15Q96QU1 1955 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 SPTBN2O15020 2390 aa23.32■■□□□ 1.32
COL9A2-201ENST00000372736 EDDM13A0A1B0GTR0 161 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 E9PAM4 449 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 PBX1P40424 430 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 IRX4P78413 519 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 ZBTB16Q05516 673 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 ASIC2Q16515 512 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 ZNF776Q68DI1 518 aaPredicted RBP23.31■■□□□ 1.32
COL9A2-201ENST00000372736 DNAJC24Q6P3W2 148 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 LRRC31Q6UY01 552 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 STRADAQ7RTN6 431 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 FOXJ1Q92949 421 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 NUP58Q9BVL2 599 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 AIPL1Q9NZN9 384 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 MPP6Q9NZW5 540 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 ZNF212Q9UDV6 495 aa23.31■■□□□ 1.32
COL9A2-201ENST00000372736 TARSL2A2RTX5 802 aaKnown RBP23.3■■□□□ 1.32
COL9A2-201ENST00000372736 DCDC2BA2VCK2 349 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 SIGLEC16A6NMB1 481 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 VASPP50552 380 aaPredicted RBP23.3■■□□□ 1.32
COL9A2-201ENST00000372736 HDAC4P56524 1084 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 SKOR2Q2VWA4 1001 aaPredicted RBP23.3■■□□□ 1.32
COL9A2-201ENST00000372736 FIGNQ5HY92 759 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 PPP1R15BQ5SWA1 713 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 SFMBT2Q5VUG0 894 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 ACAD10Q6JQN1 1059 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 SLC23A3Q6PIS1 610 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 WDR59Q6PJI9 974 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 TFAP2DQ7Z6R9 452 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 FAM124AQ86V42 546 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 MCOLN2Q8IZK6 566 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 FAM172AQ8WUF8 416 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 EDEM3Q9BZQ6 932 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 VPS28Q9UK41 221 aa23.3■■□□□ 1.32
COL9A2-201ENST00000372736 DNTTP04053 509 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 TNFAIP3P21580 790 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 GPD1P21695 349 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 RRM1P23921 792 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 PRKCIP41743 596 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 CACNA1EQ15878 2313 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 TTC31Q49AM3 519 aaPredicted RBP23.29■■□□□ 1.32
COL9A2-201ENST00000372736 SETD3Q86TU7 594 aaPredicted RBP23.29■■□□□ 1.32
COL9A2-201ENST00000372736 CADM4Q8NFZ8 388 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 FRS2Q8WU20 508 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 PTPRN2Q92932 1015 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 MCEEQ96PE7 176 aa23.29■■□□□ 1.32
COL9A2-201ENST00000372736 PPP1R9BQ96SB3 815 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms