RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SLC26A4O43511 780 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ADAM23O75077 832 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 STBD1O95210 358 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 KCNH1O95259 989 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ATE1O95260 518 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TRUB2O95900 331 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 APOC2P02655 101 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 FUCA1P04066 466 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 FAM58BPP0C7Q3 252 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 RCVRNP35243 200 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SERPINB8P50452 374 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 NME5P56597 212 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SP2Q02086 613 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 WASHC5Q12768 1159 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 BNIP3Q12983 259 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 NME3Q13232 169 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 CYLC2Q14093 348 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PGM5Q15124 567 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 FGD3Q5JSP0 725 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 GJC2Q5T442 439 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PRR23BQ6ZRT6 265 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 GK5Q6ZS86 529 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 EEPD1Q7L9B9 569 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 BTLAQ7Z6A9 289 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 XYLT1Q86Y38 959 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SLC7A5P1Q8MH63 180 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PARP8Q8N3A8 854 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 LRRC71Q8N4P6 559 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MARVELD2Q8N4S9 558 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM35BQ8NCS4 154 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF280CQ8ND82 737 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PSD4Q8NDX1 1056 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TSPAN14Q8NG11 270 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PCDH19Q8TAB3 1148 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PPP1R13LQ8WUF5 828 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SGCDQ92629 289 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 EME1Q96AY2 570 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ZDHHC15Q96MV8 337 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF341Q9BYN7 854 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PAIP1Q9H074 479 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 NOL11Q9H8H0 719 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 IL1RL2Q9HB29 575 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 LTB4R2Q9NPC1 389 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 SACM1LQ9NTJ5 587 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 C20orf96Q9NUD7 363 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ADA2Q9NZK5 511 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 EXOC7Q9UPT5 735 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MRPL11Q9Y3B7 192 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 CORINQ9Y5Q5 1042 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 FOCADQ5VW36 1801 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 A0A1W2PPW3 197 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 A6NL46 340 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 KCNU1A8MYU2 1149 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 K7ERI5 159 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 M0QYV0 167 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 AGRPO00253 132 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PAPSS1O43252 624 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TIMM44O43615 452 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TIPRLO75663 272 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ZBED1O96006 694 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 RALBP11234 206 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TPH1P17752 444 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PIK3R1P27986 724 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 GABRB3P28472 473 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 CRHR1P34998 444 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 CAP2P40123 477 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 BAATQ14032 418 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ADGRE1Q14246 886 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PIGHQ14442 188 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 NOMO1Q15155 1222 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF423Q2M1K9 1284 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 LSM12Q3MHD2 195 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MGAT5BQ3V5L5 792 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 STYK1Q6J9G0 422 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 AAGABQ6PD74 315 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 HHIPL2Q6UWX4 724 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PCGF5Q86SE9 256 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 PIGZQ86VD9 579 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TRIM50Q86XT4 487 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 C4orf19Q8IY42 314 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 LRRC43Q8N309 656 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 UBR7Q8N806 425 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 RXFP2Q8WXD0 754 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM79Q9BSE2 394 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 HAUS8Q9BT25 410 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MUC3BQ9H195 1237 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 RETREG1Q9H6L5 497 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MTMR10Q9NXD2 777 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 RRN3Q9NYV6 651 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 UBP1Q9NZI7 540 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 DMTF1Q9Y222 760 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 MTF2Q9Y483 593 aaPredicted RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 UBIAD1Q9Y5Z9 338 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 V9GYQ6 96 aa5.54□□□□□ -1.52
ATG4A-204ENST00000372246 COL14A1Q05707 1796 aaKnown RBP5.54□□□□□ -1.52
ATG4A-204ENST00000372246 NEMP2A6NFY4 417 aa5.53□□□□□ -1.52
ATG4A-204ENST00000372246 K7EPI3 171 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms