RNA–Protein interactions for RNA: ENST00000371747.7

TTC39A-203, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-203ENST00000371747 CMTR2Q8IYT2 770 aaKnown RBP23.31■■□□□ 1.32
TTC39A-203ENST00000371747 ATPAF2Q8N5M1 289 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 ZNF461Q8TAF7 563 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 CCT8L2Q96SF2 557 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 HERC2P3Q9BVR0 1158 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 TRABDQ9H4I3 376 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 SENP1Q9P0U3 644 aa23.31■■□□□ 1.32
TTC39A-203ENST00000371747 EFCAB14O75071 495 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 HMBSP08397 361 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 ANKRD42Q8N9B4 389 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 SLC44A1Q8WWI5 657 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 PRMT1Q99873 361 aaKnown RBP23.3■■□□□ 1.32
TTC39A-203ENST00000371747 TRIM56Q9BRZ2 755 aaKnown RBP23.3■■□□□ 1.32
TTC39A-203ENST00000371747 PCDHA11Q9Y5I1 949 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 ALPK3Q96L96 1907 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 SDR42E2A6NKP2 422 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 MAFKO60675 156 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 FAM107AO95990 144 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 LAG3P18627 525 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 NFKB1P19838 968 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 PRKCHP24723 683 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 SPARCL1Q14515 664 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 MGARPQ8TDB4 240 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 CCDC134Q9H6E4 229 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 KIF9Q9HAQ2 790 aa23.3■■□□□ 1.32
TTC39A-203ENST00000371747 PPARGC1AQ9UBK2 798 aaKnown RBP23.3■■□□□ 1.32
TTC39A-203ENST00000371747 A0A1W2PPM1 405 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 SUN1O94901 812 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 AP2A1O95782 977 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 HNRNPH2P55795 449 aaKnown RBP23.29■■□□□ 1.32
TTC39A-203ENST00000371747 SESN2P58004 480 aaPredicted RBP23.29■■□□□ 1.32
TTC39A-203ENST00000371747 RING1Q06587 406 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 TPGS2Q68CL5 300 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 TMEM199Q8N511 208 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 GSDMBQ8TAX9 411 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 MZB1Q8WU39 189 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 STAMBPL1Q96FJ0 436 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 PIH1D1Q9NWS0 290 aaKnown RBP23.29■■□□□ 1.32
TTC39A-203ENST00000371747 SPG21Q9NZD8 308 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 FNIP2Q9P278 1114 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 HSFX1Q9UBD0 423 aa23.29■■□□□ 1.32
TTC39A-203ENST00000371747 ARHGAP42A6NI28 874 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CCNB1P14635 433 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 RHOQP17081 205 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 MGAT1P26572 445 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 LRRC14Q15048 493 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 KCTD11Q693B1 232 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 ZNF276Q8N554 614 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CNTD1Q8N815 330 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 ZNF473Q8WTR7 871 aaKnown RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 MLPHQ9BV36 600 aaPredicted RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 ZYG11BQ9C0D3 744 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 DOCK4Q8N1I0 1966 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 IGLV3-10A0A075B6K4 115 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 MATN3O15232 486 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CCT5P48643 541 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 KPNA1P52294 538 aaPredicted RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CRADDP78560 199 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 OLIG2Q13516 323 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 RAP1GAP2Q684P5 730 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 DDX53Q86TM3 631 aaKnown RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 PDZD8Q8NEN9 1154 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 USP33Q8TEY7 942 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 ARNTL2Q8WYA1 636 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 OVCA2Q8WZ82 227 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 SMC6Q96SB8 1091 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CDK5RAP1Q96SZ6 601 aaKnown RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 NOL6Q9H6R4 1146 aaKnown RBP23.28■■□□□ 1.32
TTC39A-203ENST00000371747 CYP4F11Q9HBI6 524 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 IKBKGQ9Y6K9 419 aa23.28■■□□□ 1.32
TTC39A-203ENST00000371747 NYNRINQ9P2P1 1898 aaKnown RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 ERI2A8K979 691 aaKnown RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 CXorf49A8MYA2 514 aaPredicted RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 PRPF4O43172 522 aaKnown RBP eCLIP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 SPAG7O75391 227 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 INHBAP08476 426 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 HMGA1P17096 107 aaKnown RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 IFNAR2P48551 515 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 PAPOLAP51003 745 aaKnown RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 SNX30Q5VWJ9 437 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 STEAP4Q687X5 459 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 NUGGCQ68CJ6 796 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 FBXL22Q6P050 247 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 CASC4Q6P4E1 433 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 C16orf59Q7L2K0 433 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 LRRC49Q8IUZ0 686 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 C4orf33Q8N1A6 199 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 UMODL1-AS1Q8N2C9 162 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 PPM1NQ8N819 430 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 OR52K1Q8NGK4 314 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 CHMP6Q96FZ7 201 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 ZNF512Q96ME7 567 aaPredicted RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 ZNF317Q96PQ6 595 aaPredicted RBP23.27■■□□□ 1.32
TTC39A-203ENST00000371747 IL12RB2Q99665 862 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 FAM107BQ9H098 131 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 SMYD2Q9NRG4 433 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 TMEM248Q9NWD8 314 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 NKIRAS1Q9NYS0 192 aa23.27■■□□□ 1.32
TTC39A-203ENST00000371747 FAM47DPA6NHR8 397 aa23.26■■□□□ 1.31
TTC39A-203ENST00000371747 CNTN5O94779 1100 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms