RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TSPAN8P19075 237 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 POLR2EP19388 210 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 RUNX1T1Q06455 604 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 MOGQ16653 247 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 EFHC2Q5JST6 749 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 RWDD4Q6NW29 188 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 GK5Q6ZS86 529 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ALLCQ8N6M5 410 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 DNAJB14Q8TBM8 379 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ADI1Q9BV57 179 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 HESX1Q9UBX0 185 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 GNPTGQ9UJJ9 305 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 WDR27A2RRH5 827 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 K7ERI5 159 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 APOL1O14791 398 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 CLASP2O75122 1294 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 CPNE3O75131 537 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 FAM163BP0C2L3 166 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 CDH1P12830 882 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 NPR1P16066 1061 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 AZGP1P25311 298 aaKnown RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 MYBPC1Q00872 1141 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 SPPL2CQ8IUH8 684 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 TCF12Q99081 682 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 OMDQ99983 421 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 SLC39A3Q9BRY0 314 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 NEK6Q9HC98 313 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 TUFT1Q9NNX1 390 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 SPATA2Q9UM82 520 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 FAM47E-STBD1D6RA91 191 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 HS6ST1O60243 411 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 GUCY1B2O75343 617 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ERVK-10P10266 1014 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ITIH1P19827 911 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 DLG2Q15700 870 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 DENND1BQ6P3S1 775 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 KLHL17Q6TDP4 642 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 KCNT2Q6UVM3 1135 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 RAB44Q7Z6P3 723 aaPredicted RBP12□□□□□ -0.49
PTPN1-201ENST00000371621 SPATA6LQ8N4H0 392 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ANKLE1Q8NAG6 615 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 MTMR9Q96QG7 549 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 BEX2Q9BXY8 128 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 NUAK2Q9H093 628 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 RUBCNLQ9H714 662 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 FAM49BQ9NUQ9 324 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 TMLHEQ9NVH6 421 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF224Q9NZL3 707 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 C3P01024 1663 aa12□□□□□ -0.49
PTPN1-201ENST00000371621 A0A096LPK6 155 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TYROBPO43914 113 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ABATP80404 500 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TMEM119Q4V9L6 283 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ARMCX4Q5H9R4 360 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 MARVELD2Q8N4S9 558 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 MAGED4Q96JG8 741 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 C7orf26Q96N11 449 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 KCNU1A8MYU2 1149 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM38O00635 465 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 NBNO60934 754 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 PRKCBP05771 671 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ZNF37AP17032 561 aaPredicted RBP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ADSSP30520 456 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 CD300CQ08708 224 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 LRRC20Q8TCA0 184 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ACTRT2Q8TDY3 377 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 HAS1Q92839 578 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 VPS33AQ96AX1 596 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TMEM246Q9BRR3 403 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TP63Q9H3D4 680 aaPredicted RBP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 A0A1B0GTW7 788 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 M0QYV0 167 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 POLBP06746 335 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 IL1R1P14778 569 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 PRKACAP17612 351 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 GTF2A2P52657 109 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 RAB15P59190 212 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 CHRNB3Q05901 458 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 NSUN2Q08J23 767 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TAB1Q15750 504 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 PLA2G4FQ68DD2 849 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 TRIM72Q6ZMU5 477 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 NETO2Q8NC67 525 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 INIPQ9NRY2 104 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 ERVK-11Q9UQG0 969 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 WBP11Q9Y2W2 641 aaKnown RBP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 SPATA31A3Q5VYP0 1347 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 SETD1AO15047 1707 aaKnown RBP11.99□□□□□ -0.49
PTPN1-201ENST00000371621 MON2Q7Z3U7 1717 aa11.99□□□□□ -0.49
PTPN1-201ENST00000371621 DHRS12A0PJE2 317 aa11.98□□□□□ -0.49
PTPN1-201ENST00000371621 FARP2O94887 1054 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms