RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PRKD1Q15139 912 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 FAM78AQ5JUQ0 283 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 C4orf22Q6V702 233 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 IFT20Q8IY31 132 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 CFAP52Q8N1V2 620 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ATPAF2Q8N5M1 289 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ZNF557Q8N988 423 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 HTR3CQ8WXA8 447 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 RTP4Q96DX8 246 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 ANKZF1Q9H8Y5 726 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 PCDH9Q9HC56 1237 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 DMGDHQ9UI17 866 aaKnown RBP12.63□□□□□ -0.39
TUBE1-202ENST00000368662 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
TUBE1-202ENST00000368662 DFFAO00273 331 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 NDC80O14777 642 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 KCNN4O15554 427 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 TSPAN3O60637 253 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 TBL1XO60907 577 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 IFNB1P01574 187 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 KRT14P02533 472 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CCNCP24863 283 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 RBL1P28749 1068 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 DRG2P55039 364 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 OXCT1P55809 520 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 SLC7A5Q01650 507 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 ELF2Q15723 593 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 TIGD7Q6NT04 549 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 POTEHQ6S545 545 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 BPIFB1Q8TDL5 484 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 LGMNQ99538 433 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 SLC39A8Q9C0K1 460 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 MAGEH1Q9H213 219 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CD207Q9UJ71 328 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 REV3LO60673 3130 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 ILVBLA1L0T0 632 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 H0Y626 953 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 SCAMP3O14828 347 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 MRPS25P82663 173 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 P3H1Q32P28 736 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 WDR93Q6P2C0 686 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CIR1Q86X95 450 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CCDC13Q8IYE1 715 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 OSCP1Q8WVF1 389 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 SEC14L1Q92503 715 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 USP29Q9HBJ7 922 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 ZFP14Q9HCL3 533 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
TUBE1-202ENST00000368662 ASIC3Q9UHC3 531 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 CDH22Q9UJ99 828 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 BRWD1Q9NSI6 2320 aa12.62□□□□□ -0.39
TUBE1-202ENST00000368662 SPTBN5Q9NRC6 3674 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 RASA4BC9J798 803 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 RASA4O43374 803 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 RHOCP08134 193 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 GBP2P32456 591 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 SGSHP51688 502 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 CUL1Q13616 776 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 CDH18Q13634 790 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 RNF43Q68DV7 783 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 MFN1Q8IWA4 741 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 FATE1Q969F0 183 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 VAT1Q99536 393 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 NOL6Q9H6R4 1146 aaKnown RBP12.61□□□□□ -0.39
TUBE1-202ENST00000368662 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 GDF3Q9NR23 364 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 C5orf60A6NFR6 353 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 GCATO75600 419 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 LAMP2P13473 410 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 TNFRSF8P28908 595 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 ADCY8P40145 1251 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 VIPR2P41587 438 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 IFNAR2P48551 515 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 GDF10P55107 478 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 GNA12Q03113 381 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 ANO4Q32M45 955 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 TPGS1Q6ZTW0 290 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 TP53INP2Q8IXH6 220 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 ADGRG2Q8IZP9 1017 aa12.61□□□□□ -0.39
TUBE1-202ENST00000368662 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms