RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 KANSL3Q9P2N6 904 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 SCOCQ9UIL1 159 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 STAP1Q9ULZ2 295 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CHMP2BQ9UQN3 213 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 TTLL3Q9Y4R7 772 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 HNRNPRO43390 633 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 DAB1O75553 588 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 OAS1P00973 400 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 CYP11A1P05108 521 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 OR1D2P34982 312 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 YWHAGP61981 247 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-212ENST00000368533 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 DBN1Q16643 649 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 ACBD5Q5T8D3 534 aaPredicted RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 PDIK1LQ8N165 341 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 RIBC1Q8N443 379 aaPredicted RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 FBXO36Q8NEA4 188 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 UROC1Q96N76 676 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 NPY6RQ99463 290 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 PKMYT1Q99640 499 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 DENND2DQ9H6A0 471 aaPredicted RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 PSMC3IPQ9P2W1 217 aaPredicted RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 DCTN4Q9UJW0 460 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 DRG1Q9Y295 367 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 APOC4-APOC2K7ER74 178 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 DPYSL4O14531 572 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 ALOX15BO15296 676 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 MFSD11O43934 449 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 APOC2P02655 101 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 ABHD2P08910 425 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 EN2P19622 333 aaPredicted RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 RPL22P35268 128 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 PTPN9P43378 593 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 ROR1Q01973 937 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 AP1B1Q10567 949 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CCDC6Q16204 474 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 TSNAXIP1Q2TAA8 658 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 FNBP1LQ5T0N5 605 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CTAGE3PQ8IX95 158 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 SLC35B2Q8TB61 432 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 CASP10Q92851 521 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 LRRC37BQ96QE4 947 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 TRIM56Q9BRZ2 755 aaKnown RBP10.93□□□□□ -0.66
TPM3-212ENST00000368533 VCXQ9H320 206 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 GMIPQ9P107 970 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 DSEQ9UL01 958 aa10.93□□□□□ -0.66
TPM3-212ENST00000368533 KCNK1O00180 336 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 UNC5CO95185 931 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 ITGAVP06756 1048 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 ARL4AP40617 200 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 GEMIN4P57678 1058 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 C1QTNF8P60827 252 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 OVGP1Q12889 678 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 OLIG2Q13516 323 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 MSS51Q4VC12 460 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 KHDC1Q4VXA5 237 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 ANKRD33Q7Z3H0 272 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 TRIM42Q8IWZ5 723 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 ATP11CQ8NB49 1132 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 DQX1Q8TE96 717 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 RNF139Q8WU17 664 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 KCTD13Q8WZ19 329 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 IFT43Q96FT9 208 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 GBP5Q96PP8 586 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 C11orf84Q9BUA3 381 aaPredicted RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 WDCPQ9H6R7 721 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 NPHS2Q9NP85 383 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 CNGB3Q9NQW8 809 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 TBX21Q9UL17 535 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 FZD10Q9ULW2 581 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 SHOC2Q9UQ13 582 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 NVLO15381 856 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 HSPA8P11142 646 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 GCAP28676 217 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 EFEMP1Q12805 493 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 KCNT2Q6UVM3 1135 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 C4orf50Q6ZRC1 276 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 SPRED2Q7Z698 418 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 TTC13Q8NBP0 860 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 SNRNP27Q8WVK2 155 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 NRG4Q8WWG1 115 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 NKD2Q969F2 451 aaPredicted RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 FAM136AQ96C01 138 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 GRAMD1AQ96CP6 724 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 COLEC11Q9BWP8 271 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 VN1R3Q9BXE9 311 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 C11orf49Q9H6J7 331 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.92□□□□□ -0.66
TPM3-212ENST00000368533 SMG5Q9UPR3 1016 aaKnown RBP10.92□□□□□ -0.66
TPM3-212ENST00000368533 ACTL7BQ9Y614 415 aa10.92□□□□□ -0.66
TPM3-212ENST00000368533 SF3B1O75533 1304 aaKnown RBP eCLIP10.91□□□□□ -0.667e-7■■■■■ 108.6
TPM3-212ENST00000368533 TSC2P49815 1807 aa10.91□□□□□ -0.66
TPM3-212ENST00000368533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.91□□□□□ -0.66
TPM3-212ENST00000368533 EEF2KO00418 725 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms