RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CDKN3Q16667 212 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 SETMARQ53H47 684 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 MPP7Q5T2T1 576 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 RFWD3Q6PCD5 774 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CRTC1Q6UUV9 634 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 EFL1Q7Z2Z2 1120 aaKnown RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 XXYLT1Q8NBI6 393 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
VAMP4-202ENST00000367740 MYOCQ99972 504 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 FUCA2Q9BTY2 467 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 DUSP23Q9BVJ7 150 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CCDC39Q9UFE4 941 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 ERVW-1Q9UQF0 538 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 PCDHGA7Q9Y5G6 932 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 LRRK1Q38SD2 2015 aa15.19■□□□□ 0.02
VAMP4-202ENST00000367740 CRYBG3Q68DQ2 2970 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 CSMD1Q96PZ7 3565 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 TCEA3O75764 348 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 BMP15O95972 392 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 C4BPAP04003 597 aaKnown RBP15.18■□□□□ 0.02
VAMP4-202ENST00000367740 SLFN14P0C7P3 912 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 P4HA1P13674 534 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 INCA1Q0VD86 236 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 RRAGBQ5VZM2 374 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 ZCCHC8Q6NZY4 707 aaKnown RBP15.18■□□□□ 0.02
VAMP4-202ENST00000367740 BHLHA9Q7RTU4 235 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 MFN1Q8IWA4 741 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 SLC22A18ASQ8N1D0 253 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 OR13H1Q8NG92 308 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 HTR3CQ8WXA8 447 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 DUSP16Q9BY84 665 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 ACSL6Q9UKU0 697 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 HBS1LQ9Y450 684 aaKnown RBP15.18■□□□□ 0.02
VAMP4-202ENST00000367740 CELSR2Q9HCU4 2923 aa15.18■□□□□ 0.02
VAMP4-202ENST00000367740 CPED1A4D0V7 1026 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 LRRIQ3A6PVS8 624 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SLC7A4O43246 635 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SRPRAP08240 638 aaKnown RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 WT1P19544 449 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SLC6A4P31645 630 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 CYP4F2P78329 520 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 ELAVL3Q14576 367 aaKnown RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 DRAP1Q14919 205 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 PERM1Q5SV97 790 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 PPP1R26Q5T8A7 1209 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 PIK3R6Q5UE93 754 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 AGBL4Q5VU57 503 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SPOPLQ6IQ16 392 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 EPM2AIP1Q7L775 607 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 CCDC65Q8IXS2 484 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 FIBINQ8TAL6 211 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 PRICKLE1Q96MT3 831 aaPredicted RBP15.17■□□□□ 0.02
VAMP4-202ENST00000367740 CALN1Q9BXU9 219 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 LRRC4CQ9HCJ2 640 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SFMBT1Q9UHJ3 866 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 SLCO3A1Q9UIG8 710 aa15.17■□□□□ 0.02
VAMP4-202ENST00000367740 GOLGA6L7A0A1B0GV03 622 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 EME2A4GXA9 379 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 MSI1O43347 362 aaKnown RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 RNGTTO60942 597 aaKnown RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 LIPCP11150 499 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 VAV1P15498 845 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 PRLRP16471 622 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 TRIM21P19474 475 aaKnown RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 CLDN10P78369 228 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 FAM133BQ5BKY9 247 aaKnown RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF542PQ5EBM4 170 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 PITRM1Q5JRX3 1037 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 RAB41Q5JT25 222 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 MMS22LQ6ZRQ5 1243 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 VASH2Q86V25 355 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF548Q8NEK5 533 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 ZNF507Q8TCN5 953 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 LIN37Q96GY3 246 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 NOX5Q96PH1 765 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 NT5C1AQ9BXI3 368 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 FZD3Q9NPG1 666 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 OLA1Q9NTK5 396 aaKnown RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 STIM2Q9P246 746 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 PLEKHB1Q9UF11 243 aaPredicted RBP15.16■□□□□ 0.02
VAMP4-202ENST00000367740 SRPK3Q9UPE1 567 aa15.16■□□□□ 0.02
VAMP4-202ENST00000367740 CACNA1DQ01668 2161 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 PLD2O14939 933 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 SLC31A1O15431 190 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 CASRP41180 1078 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 AP3M2P53677 418 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 SGSM1Q2NKQ1 1148 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 FSCBQ5H9T9 825 aa15.15■□□□□ 0.02
VAMP4-202ENST00000367740 PARD3BQ8TEW8 1205 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms