RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PITRM1Q5JRX3 1037 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 BRMS1LQ5PSV4 323 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 DAB2IPQ5VWQ8 1189 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 DCUN1D2Q6PH85 259 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 ARMCX6Q7L4S7 300 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 BNIPLQ7Z465 357 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 GAS2L3Q86XJ1 694 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 VSTM4Q8IW00 320 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 TMEFF1Q8IYR6 380 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 WFIKKN2Q8TEU8 576 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 UCMAQ8WVF2 138 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 LMLNQ96KR4 655 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 GABRG3Q99928 467 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 EDEM3Q9BZQ6 932 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 GPATCH2LQ9NWQ4 482 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 THAP10Q9P2Z0 257 aaPredicted RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 CNOT8Q9UFF9 292 aaKnown RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 ANGPTL2Q9UKU9 493 aa15.11■□□□□ 0.01
SF3B5-201ENST00000367569 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
SF3B5-201ENST00000367569 A0A1B0GVM2 712 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 TCAF2A6NFQ2 919 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 E9PAM4 449 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 CDX4O14627 284 aaPredicted RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 GIPC1O14908 333 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 FTLP02792 175 aaPredicted RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 PTPN9P43378 593 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 GSCP56915 257 aaPredicted RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 ZNF252P-AS1Q0IIN9 211 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 EIF4HQ15056 248 aaKnown RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 PPP1R15BQ5SWA1 713 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 SPECC1LQ69YQ0 1117 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 SDE2Q6IQ49 451 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 CXorf57Q6NSI4 855 aaKnown RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 PSAPL1Q6NUJ1 521 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 SCYL2Q6P3W7 929 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 LPCAT2Q7L5N7 544 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 TMC6Q7Z403 805 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 CCDC117Q8IWD4 279 aaPredicted RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 FIBINQ8TAL6 211 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 KCNV2Q8TDN2 545 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 PGAP3Q96FM1 320 aaPredicted RBP15.1■□□□□ 0.01
SF3B5-201ENST00000367569 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 CD248Q9HCU0 757 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 TMEM9BQ9NQ34 198 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 TMEM74BQ9NUR3 256 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 ARHGAP20Q9P2F6 1191 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 ADAMTS1Q9UHI8 967 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 CYP8B1Q9UNU6 501 aa15.1■□□□□ 0.01
SF3B5-201ENST00000367569 A0A087X0T9 212 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 SIGLEC16A6NMB1 481 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 FAM72CH0Y354 149 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 SERPING1P05155 500 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 FAM228BP0C875 321 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 POLR2EP19388 210 aaKnown RBP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 NOVA1P51513 510 aaKnown RBP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 ADKP55263 362 aaKnown RBP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 STARD3Q14849 445 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 ST3GAL2Q16842 350 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 PLEKHG6Q3KR16 790 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 MPP7Q5T2T1 576 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 FAM72AQ5TYM5 149 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 FAM72DQ6L9T8 149 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 FAM72BQ86X60 149 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 ZNF683Q8IZ20 524 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 PYROXD2Q8N2H3 581 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 DEFB119Q8N690 84 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 RPL10LQ96L21 214 aaKnown RBP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 TRIM5Q9C035 493 aa15.09■□□□□ 0.01
SF3B5-201ENST00000367569 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 ATXN2Q99700 1313 aaKnown RBP15.09■□□□□ 0.01
SF3B5-201ENST00000367569 ANKRD62A6NC57 917 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 MFAP3LO75121 409 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 F9P00740 461 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 PSMA2P25787 234 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 EIF4A3P38919 411 aaKnown RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 SHC2P98077 582 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 MAMLD1Q13495 774 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 BYSLQ13895 437 aaKnown RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 TRIM61Q5EBN2 209 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 ARTNQ5T4W7 220 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 TTC39BQ5VTQ0 682 aaPredicted RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 RNF219Q5W0B1 726 aaPredicted RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 KIAA0907Q7Z7F0 614 aaPredicted RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 SYT12Q8IV01 421 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 DRC7Q8IY82 874 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 BTBD6Q96KE9 485 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 MKRN2Q9H000 416 aaKnown RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 EVLQ9UI08 416 aaPredicted RBP15.08■□□□□ 0
SF3B5-201ENST00000367569 PAXBP1Q9Y5B6 917 aa15.08■□□□□ 0
SF3B5-201ENST00000367569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.07■□□□□ 0
SF3B5-201ENST00000367569 TTC34A8MYJ7 566 aa15.07■□□□□ 0
SF3B5-201ENST00000367569 SYNCRIPO60506 623 aaKnown RBP15.07■□□□□ 0
SF3B5-201ENST00000367569 RTN2O75298 545 aa15.07■□□□□ 0
SF3B5-201ENST00000367569 RHOCP08134 193 aa15.07■□□□□ 0
SF3B5-201ENST00000367569 DLDP09622 509 aaKnown RBP15.07■□□□□ 0
SF3B5-201ENST00000367569 VAV1P15498 845 aa15.07■□□□□ 0
SF3B5-201ENST00000367569 GLDCP23378 1020 aa15.07■□□□□ 0
SF3B5-201ENST00000367569 ITPKAP23677 461 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms