RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 PPP6R2O75170 966 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TIPRLO75663 272 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 PMS2P2O95744 297 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 MYZAPP0CAP1 466 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 MYF5P13349 255 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 PAX1P15863 534 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TYMPP19971 482 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 GNLYP22749 145 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC8A1P32418 973 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC16A2P36021 539 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 POLE2P56282 527 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SCAND1P57086 179 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 KRTAP12-4P60329 112 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 EIF4A1P60842 406 aaKnown RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 LYZP61626 148 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 GNB1P62873 340 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 PITX1P78337 314 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 POU5F1Q01860 360 aaKnown RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 DEUP1Q05D60 604 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC20A2Q08357 652 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TEFQ10587 303 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZBTB17Q13105 803 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TNFAIP1Q13829 316 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 CLCA4Q14CN2 919 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SHHQ15465 462 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SNAI3Q3KNW1 292 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 RNF212Q495C1 297 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ENTPD8Q5MY95 495 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 CCNYL2Q5T2Q4 361 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 EMC10Q5UCC4 262 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SFMBT2Q5VUG0 894 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TYW3Q6IPR3 259 aaKnown RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 HIBCHQ6NVY1 386 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 CNNM4Q6P4Q7 775 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF613Q6PF04 617 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF474Q6S9Z5 364 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 NOTCH2NLQ7Z3S9 236 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF280BQ86YH2 543 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 DSELQ8IZU8 1212 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 CIARTQ8N365 385 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC25A41Q8N5S1 370 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 DPP10Q8N608 796 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 DDX51Q8N8A6 666 aaKnown RBP eCLIP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC43A3Q8NBI5 491 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 RFWD2Q8NHY2 731 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 LNX1Q8TBB1 728 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 DNAJB14Q8TBM8 379 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TMEM163Q8TC26 289 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SLC35F5Q8WV83 523 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNRF4Q8WWF5 429 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF333Q96JL9 665 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZIM3Q96PE6 472 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 GFM1Q96RP9 751 aaKnown RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 GMLQ99445 158 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 SYT11Q9BT88 431 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 KAT14Q9H8E8 782 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 WFDC1Q9HC57 220 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 FGF22Q9HCT0 170 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 PTPRHQ9HD43 1115 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 TLR8Q9NR97 1041 aaKnown RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 VPS45Q9NRW7 570 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ABHD10Q9NUJ1 306 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 GPR83Q9NYM4 423 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 KLK13Q9UKR3 277 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ASAP1Q9ULH1 1129 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 ZNF256Q9Y2P7 627 aaPredicted RBP0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 MOB4Q9Y3A3 225 aa0.22□□□□□ -2.37
RNU6-54P-201ENST00000365563 A0A0G2JLW4 131 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 SRRM4A7MD48 611 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 NPIPB11E5RHQ5 1161 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 STMND1H3BQB6 276 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PRYO14603 147 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DVL1O14640 695 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 CD3EAPO15446 510 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MSI1O43347 362 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 BCL2L11O43521 198 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 CA12O43570 354 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 SNX2O60749 519 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF821O75541 412 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAGE7O76087 117 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RASAL1O95294 804 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 CAVIN2O95810 425 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MAP4K4O95819 1239 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 THP07101 528 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAGE12FP0CL80 117 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAGE12GP0CL81 117 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAGE12IP0CL82 117 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMEM225BP0DP42 221 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 AGXTP21549 392 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 AVPR1AP37288 418 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PGFP49763 221 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GATMP50440 423 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MXI1P50539 228 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF84P51523 738 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PGDP52209 483 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DGKQP52824 942 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DVL1P1P54792 670 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MS4A2Q01362 244 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 EXOSC9Q06265 439 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DMWDQ09019 674 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms