RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 TRIM67Q6ZTA4 783 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 FAM72BQ86X60 149 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 TMEM30AQ9NV96 361 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 SNX10Q9Y5X0 201 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 PSAT1Q9Y617 370 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 COL1A2P08123 1366 aa16.58■□□□□ 0.24
IFT140-201ENST00000361339 A0A088AWK7 358 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 VILLO15195 856 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 APOEP02649 317 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 ABCG1P45844 678 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 SULT1E1P49888 294 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 CHN2P52757 468 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 DCAF4L1Q3SXM0 396 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 UBXN11Q5T124 520 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 NOTUMQ6P988 496 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 ZNF410Q86VK4 478 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 GALNT4Q8N4A0 578 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 ANKRD52Q8NB46 1076 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 PRPF18Q99633 342 aaKnown RBP16.57■□□□□ 0.24
IFT140-201ENST00000361339 RHOBTB2Q9BYZ6 727 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 SSU72Q9NP77 194 aaKnown RBP16.57■□□□□ 0.24
IFT140-201ENST00000361339 BOLA2-SMG1P6H3BVE0 249 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 PIRO00625 290 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 PENKP01210 267 aaPredicted RBP16.57■□□□□ 0.24
IFT140-201ENST00000361339 SNX17Q15036 470 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 USP50Q70EL3 339 aaPredicted RBP16.57■□□□□ 0.24
IFT140-201ENST00000361339 SLC26A9Q7LBE3 791 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 NUDCD3Q8IVD9 361 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 ICA1LQ8NDH6 482 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 STKLD1Q8NE28 680 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 E2F7Q96AV8 911 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 DGCR14Q96DF8 476 aaKnown RBP16.57■□□□□ 0.24
IFT140-201ENST00000361339 ZNF232Q9UNY5 417 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 LZTS1Q9Y250 596 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 INPP5FQ9Y2H2 1132 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 USP3Q9Y6I4 520 aa16.57■□□□□ 0.24
IFT140-201ENST00000361339 TTC36A6NLP5 189 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 KCNK1O00180 336 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SPDYAQ5MJ70 313 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 TTC39BQ5VTQ0 682 aaPredicted RBP16.56■□□□□ 0.24
IFT140-201ENST00000361339 PAQR9Q6ZVX9 377 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 CAPN14A8MX76 684 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 PEX1O43933 1283 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 NCF2P19878 526 aaPredicted RBP16.56■□□□□ 0.24
IFT140-201ENST00000361339 PGGT1BP53609 377 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 GRB14Q14449 540 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 WSCD1Q658N2 575 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SPNS2Q8IVW8 549 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 METTL25Q8N6Q8 603 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.56■□□□□ 0.24
IFT140-201ENST00000361339 ZFP28Q8NHY6 868 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 CENPIQ92674 756 aaPredicted RBP16.56■□□□□ 0.24
IFT140-201ENST00000361339 PPCSQ9HAB8 311 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 ZNF510Q9Y2H8 683 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 A0A1B0GTW7 788 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 NRP1O14786 923 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 BCAT1P54687 386 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 TLR1Q15399 786 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SH2D4BQ5SQS7 431 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 HEATR6Q6AI08 1181 aaKnown RBP16.56■□□□□ 0.24
IFT140-201ENST00000361339 LRRC8BQ6P9F7 803 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 ATG14Q6ZNE5 492 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 GPRIN1Q7Z2K8 1008 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 ADGRF2Q8IZF7 708 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 NDUFAF2Q8N183 169 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 CCNYQ8ND76 341 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 MIPOL1Q8TD10 442 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 ATXN7L3BQ96GX2 97 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 AGAP3Q96P47 875 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 KCNK16Q96T55 309 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 PCDHGA4Q9Y5G9 962 aa16.56■□□□□ 0.24
IFT140-201ENST00000361339 SNRPAP09012 282 aaKnown RBP16.55■□□□□ 0.24
IFT140-201ENST00000361339 PRKCHP24723 683 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 MGAT1P26572 445 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 CYTH1Q15438 398 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 ARHGAP17Q68EM7 881 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 B3GNT6Q6ZMB0 384 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 RNF148Q8N7C7 305 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 SMG8Q8ND04 991 aaKnown RBP16.55■□□□□ 0.24
IFT140-201ENST00000361339 APPL2Q8NEU8 664 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 ERLEC1Q96DZ1 483 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 EBNA1BP2Q99848 306 aaKnown RBP16.55■□□□□ 0.24
IFT140-201ENST00000361339 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.55■□□□□ 0.24
IFT140-201ENST00000361339 H3BSA7 217 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 NDC80O14777 642 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 ZNF189O75820 626 aaPredicted RBP16.55■□□□□ 0.24
IFT140-201ENST00000361339 PSMB4P28070 264 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 MAGEA3P43357 314 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 PTPN9P43378 593 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 MAP3K7CLP57077 242 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 LILRA4P59901 499 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 MYLK3Q32MK0 819 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 DNAL1Q4LDG9 190 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 VWA5B1Q5TIE3 1220 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 CRLF3Q8IUI8 442 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 DEFB107AQ8IZN7 70 aa16.55■□□□□ 0.24
IFT140-201ENST00000361339 LRRC52Q8N7C0 313 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms