RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 CEP44Q9C0F1 390 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 DNAJC28Q9NX36 388 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 A0A0A0MRY4 1105 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 SNAP91O60641 907 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 CNOT3O75175 753 aaKnown RBP16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 OR6B1O95007 311 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 CRABP2P29373 138 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 ZNF143P52747 638 aaPredicted RBP16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 MRPL28Q13084 256 aaKnown RBP16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 HERC6Q8IVU3 1022 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 GLIS1Q8NBF1 620 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 SPATA13Q96N96 652 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 MIPEPQ99797 713 aa16.27■□□□□ 0.2
CLSTN1-201ENST00000361311 ZNF862O60290 1169 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 CD151P48509 253 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 ATP6AP1LQ52LC2 224 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 MFSD4BQ5TF39 518 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 BNIPLQ7Z465 357 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 SCUBE3Q8IX30 993 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 PABPC5Q96DU9 382 aaKnown RBP16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 HSPBAP1Q96EW2 488 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.19
CLSTN1-201ENST00000361311 TMEM63AO94886 807 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 CXCL8P10145 99 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 SPIDRQ14159 915 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 POU6F1Q14863 301 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 NOMO1Q15155 1222 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 SLC22A9Q8IVM8 553 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 OR7A2PQ8NGA2 310 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PTCD3Q96EY7 689 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 POMKQ9H5K3 350 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 CXorf21Q9HAI6 301 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TEKT2Q9UIF3 430 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 ADAM28Q9UKQ2 775 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 AAR2Q9Y312 384 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 CNTNAP2Q9UHC6 1331 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TAF4O00268 1085 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 LSM1O15116 133 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 UBAP2Q5T6F2 1119 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 SNX19Q92543 992 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 MMP19Q99542 508 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 DDIT4Q9NX09 232 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 DPP3Q9NY33 737 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TRIM17Q9Y577 477 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TTLL13PA6NNM8 815 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 H3BSA7 217 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 RNASEH1O60930 286 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PABPC4LP0CB38 370 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 S100A1P23297 94 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 KLRC2P26717 231 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 NDST1P52848 882 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PGM5Q15124 567 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 AMHR2Q16671 573 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PGAM4Q8N0Y7 254 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 SAMD3Q8N6K7 520 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 OR52K1Q8NGK4 314 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 HPS1Q92902 700 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 C6orf62Q9GZU0 229 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 ZNF395Q9H8N7 513 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 DHRS12A0PJE2 317 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TYROBPO43914 113 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PLIN3O60664 434 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 NDUFS3O75489 264 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 GDF10P55107 478 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 CDH17Q12864 832 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 ZDHHC13Q8IUH4 622 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 DCAKDQ8WVC6 231 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 RMDN1Q96DB5 314 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 CD274Q9NZQ7 290 aa16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 RBMX2Q9Y388 322 aaKnown RBP16.26■□□□□ 0.19
CLSTN1-201ENST00000361311 TRIM43BA6NCK2 446 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 TNPO2O14787 897 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 NCAM1P13591 858 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 MPSTP25325 297 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 PSMB4P28070 264 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 IDH3AP50213 366 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SLC7A2P52569 658 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 EML3Q32P44 896 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ERI1Q8IV48 349 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 C8orf59Q8N0T1 100 aaPredicted RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ACTRT2Q8TDY3 377 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 LRCH4O75427 683 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 H6PDO95479 791 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ITGB5P18084 799 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 ADSSP30520 456 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 LSAMPQ13449 338 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SKA1Q96BD8 255 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 SNRNP25Q9BV90 132 aaKnown RBP16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 EPB41L4BQ9H329 900 aa16.25■□□□□ 0.19
CLSTN1-201ENST00000361311 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms