RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PRICKLE1Q96MT3 831 aaPredicted RBP17.5■□□□□ 0.39
TPM1-205ENST00000357980 PWWP2AQ96N64 755 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 RAB6BQ9NRW1 208 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 ATP8A1Q9Y2Q0 1164 aa17.5■□□□□ 0.39
TPM1-205ENST00000357980 TRAV19A0A0A6YYK7 116 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 TCRBV7S3A2A0A539 114 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 DFFAO00273 331 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 MTSS1O43312 755 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 XYLBO75191 536 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 TMEM63AO94886 807 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CKMP06732 381 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 RHOP08100 348 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 PTPN3P26045 913 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 NDST2P52849 883 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SLMAPQ14BN4 828 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 DUSP6Q16828 381 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SPDYCQ5MJ68 293 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ARHGAP36Q6ZRI8 547 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ATPAF2Q8N5M1 289 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 LEMD2Q8NC56 503 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ZNF707Q96C28 371 aaPredicted RBP17.49■□□□□ 0.39
TPM1-205ENST00000357980 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 FERMT1Q9BQL6 677 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SLC46A2Q9BY10 475 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 EPB41L4BQ9H329 900 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SLC28A3Q9HAS3 691 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 REV3LO60673 3130 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SMAPO00193 183 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CHADO15335 359 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 MAFKO60675 156 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 STK10O94804 968 aaKnown RBP17.49■□□□□ 0.39
TPM1-205ENST00000357980 PAPLNO95428 1278 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 METTL18O95568 372 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CCNCP24863 283 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 PMS2P54278 862 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 KCNC3Q14003 757 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SLC5A9Q2M3M2 681 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ARHGEF18Q6ZSZ5 1173 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CCDC25Q86WR0 208 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 LRRC49Q8IUZ0 686 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CCDC13Q8IYE1 715 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 IQCKQ8N0W5 287 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ZNF567Q8N184 647 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 CEP41Q9BYV8 373 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 PRKD2Q9BZL6 878 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 RETREG1Q9H6L5 497 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 TLE6Q9H808 572 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 ETNK1Q9HBU6 452 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 FAM53CQ9NYF3 392 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
TPM1-205ENST00000357980 MAPKAPK2P49137 400 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 GAD2Q05329 585 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 PRSS36Q5K4E3 855 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 FAXCQ5TGI0 409 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 RELL1Q8IUW5 271 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 CFAP52Q8N1V2 620 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 PABPC3Q9H361 631 aaKnown RBP17.48■□□□□ 0.39
TPM1-205ENST00000357980 C2orf16Q68DN1 1984 aa17.48■□□□□ 0.39
TPM1-205ENST00000357980 GFRA2O00451 464 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 DDX6P26196 483 aaKnown RBP eCLIP17.47■□□□□ 0.39
TPM1-205ENST00000357980 NRIP1P48552 1158 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 PAPOLAP51003 745 aaKnown RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 SGSHP51688 502 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 RPS24P62847 133 aaKnown RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 SEMA5AQ13591 1074 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 RABGAP1LQ5R372 815 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 ALS2CLQ60I27 953 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 ELMSAN1Q6PJG2 1045 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 FAM217AQ8IXS0 508 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 TDHQ8IZJ6 230 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 VN1R2Q8NFZ6 395 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 RBM15Q96T37 977 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■□□□ 13.8
TPM1-205ENST00000357980 PHACTR1Q9C0D0 580 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 SEMA4AQ9H3S1 761 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 DNAJC17Q9NVM6 304 aaKnown RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 ZFP37Q9Y6Q3 630 aaPredicted RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 CCDC195A0A1B0GUA6 201 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 RASA4BC9J798 803 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 TRDMT1O14717 391 aaKnown RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 RASA4O43374 803 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 CDH4P55283 916 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 TEAD2Q15562 447 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 GPR158Q5T848 1215 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 HTR3DQ70Z44 454 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 UBLCP1Q8WVY7 318 aaPredicted RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 HMCESQ96FZ2 354 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 ZNF419Q96HQ0 510 aaPredicted RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 VAT1Q99536 393 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 DDX50Q9BQ39 737 aaKnown RBP17.47■□□□□ 0.39
TPM1-205ENST00000357980 IGSF9Q9P2J2 1179 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 ARHGAP26Q9UNA1 814 aa17.47■□□□□ 0.39
TPM1-205ENST00000357980 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 SOBPA7XYQ1 873 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 GOLGA8MH3BSY2 632 aa17.46■□□□□ 0.39
TPM1-205ENST00000357980 AGPSO00116 658 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms